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View Structure Prediction Details

Protein: MSRA
Organism: Homo sapiens
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSRA.

Description E-value Query
Range
Subject
Range
gi|84579081 - gi|84579081|dbj|BAE72974.1| hypothetical protein [Macaca fascicularis]
0.0 [1..235] [1..235]
gi|109085621 - gi|109085621|ref|XP_001089893.1| PREDICTED: methionine sulfoxide reductase A isoform 3 [Macaca mulat...
0.0 [1..232] [1..232]
gi|114623478 - gi|114623478|ref|XP_001138036.1| PREDICTED: methionine sulfoxide reductase A isoform 4 [Pan troglody...
0.0 [1..235] [1..236]
MSRA_MOUSE - Mitochondrial peptide methionine sulfoxide reductase OS=Mus musculus GN=Msra PE=1 SV=1
0.0 [1..235] [1..233]
gi|59858453 - gi|59858453|gb|AAX09061.1| methionine sulfoxide reductase A [Bos taurus]
0.0 [1..235] [1..233]
MSRA_RAT - Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus GN=Msra PE=1 SV=1
0.0 [1..235] [1..233]
gi|9963779 - gi|9963779|gb|AAG09689.1|AF183420_1 peptide methionine sulfoxide reductase [Homo sapiens]
0.0 [1..235] [1..231]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSATRRACQ LLLLHSLFPV PRMGNSASNI VSPQEALPGR KEQTPVAAKH HVNGNRTVEP  60
   61 FPEGTQMAVF GMGCFWGAER KFWVLKGVYS TQVGFAGGYT SNPTYKEVCS EKTGHAEVVR 120
  121 VVYQPEHMSF EELLKVFWEN HDPTQGMRQG NDHGTQYRSA IYPTSAKQME AALSSKENYQ 180
  181 KVLSEHGFGP ITTDIREGQT FYYAEDYHQQ YLSKNPNGYC GLGGTGVSCP VGIKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1fvaA
Description: Peptide methionine sulfoxide reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor 7.33214277590189 bayes_pls_golite062009
peptide-methionine-(S)-S-oxide reductase activity 7.05871760837663 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 4.45221508174489 bayes_pls_golite062009
catalytic activity 2.02168745464921 bayes_pls_golite062009
binding 1.21670366786992 bayes_pls_golite062009
oxidoreductase activity 1.10659465297393 bayes_pls_golite062009
protein binding 0.370301035521826 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle