| Protein: | PLD1 |
| Organism: | Homo sapiens |
| Length: | 1074 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLD1.
| Description | E-value | Query Range |
Subject Range |
|
|
957.0 | [0..1] | [1074..1] |
|
|
948.0 | [0..1] | [1074..1] |
|
|
943.0 | [0..1] | [1074..1] |
|
|
934.0 | [0..1] | [1074..90] |
|
|
931.0 | [0..1] | [1074..24] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MSLKNEPRVN TSALQKIAAD MSNIIENLDT RELHFEGEEV DYDVSPSDPK IQEVYIPFSA 60
61 IYNTQGFKEP NIQTYLSG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [79-230] |
1 11 21 31 41 51
| | | | | |
1 CPIKAQVLEV ERFTSTTRVP SINLYTIELT HGEFKWQVKR KFKHFQEFHR ELLKYKAFIR 60
61 IPIPTRRHTF RRQNVREEPR EMPSLPRSSE NMIREEQFLG RRKQLEDYLT KILKMPMYRN 120
121 YHATTEFLDI SQLSFIHDLG PKGIEGMIMK RS
|
| Detection Method: | |
| Confidence: | 24.30103 |
| Match: | 1xteA |
| Description: | crystal structure of CISK-PX domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [231-339] |
1 11 21 31 41 51
| | | | | |
1 GGHRIPGLNC CGQGRACYRW SKRWLIVKDS FLLYMKPDSG AIAFVLLVDK EFKIKVGKKE 60
61 TETKYGIRID NLSRTLILKC NSYRHARWWG GAIEEFIQKH GTNFLKDHR
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2dn6A |
| Description: | No description for 2dn6A was found. |
|
Region A: Residues: [340-529] |
1 11 21 31 41 51
| | | | | |
1 FGSYAAIQEN ALAKWYVNAK GYFEDVANAM EEANEEIFIT DWWLSPEIFL KRPVVEGNRW 60
61 RLDCILKRKA QQGVRIFIML YKEVELALGI NSEYTKRTLM RLHPNIKVMR HPDHVSSTVY 120
121 LWAHHEKLVI IDQSVAFVGG IDLAYGRWDD NEHRLTDVGS VKRVTSGPSL GSLPPAAMES 180
181 MESLRLKDKN
|
| Detection Method: | |
| Confidence: | 10.39794 |
| Match: | 1byrA |
| Description: | Nuclease Nuc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [530-966] |
1 11 21 31 41 51
| | | | | |
1 EPVQNLPIQK SIDDVDSKLK GIGKPRKFSK FSLYKQLHRH HLHDADSISS IDSTSSYFNH 60
61 YRSHHNLIHG LKPHFKLFHP SSESEQGLTR PHADTGSIRS LQTGVGELHG ETRFWHGKDY 120
121 CNFVFKDWVQ LDKPFADFID RYSTPRMPWH DIASAVHGKA ARDVARHFIQ RWNFTKIMKS 180
181 KYRSLSYPFL LPKSQTTAHE LRYQVPGSVH ANVQLLRSAA DWSAGIKYHE ESIHAAYVHV 240
241 IENSRHYIYI ENQFFISCAD DKVVFNKIGD AIAQRILKAH RENQKYRVYV VIPLLPGFEG 300
301 DISTGGGNAL QAIMHFNYRT MCRGENSILG QLKAELGNQW INYISFCGLR THAELEGNLV 360
361 TELIYVHSKL LIADDNTVII GSANINDRSM LGKRDSEMAV IVQDTETVPS VMDGKEYQAG 420
421 RFARGLRLQC FRVVLGY
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1f0iA |
| Description: | Phospholipase D |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [967-1074] |
1 11 21 31 41 51
| | | | | |
1 LDDPSEDIQD PVSDKFFKEV WVSTAARNAT IYDKVFRCLP NDEVHNLIQL RDFINKPVLA 60
61 KEDPIRAEEE LKKIRGFLVQ FPFYFLSEES LLPSVGTKEA IVPMEVWT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.883 | a.8.4 | Description not found. |
| View | Download | 0.664 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.640 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.616 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.615 | a.63.1 | Apolipophorin-III |
| View | Download | 0.528 | a.4.3 | ARID-like |
| View | Download | 0.519 | a.4.3 | ARID-like |
| View | Download | 0.507 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.499 | a.29.13 | Description not found. |
| View | Download | 0.486 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.464 | a.74.1 | Cyclin-like |
| View | Download | 0.302 | a.24.23 | Description not found. |
| View | Download | 0.221 | a.74.1 | Cyclin-like |
