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View Structure Prediction Details

Protein: gi|21749123
Organism: Homo sapiens
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21749123.

Description E-value Query
Range
Subject
Range
gi|109510290 - gi|109510290|ref|XP_001068313.1| PREDICTED: similar to CG8991-PA [Rattus norvegicus]
0.0 [1..224] [58..281]
gi|109072231 - gi|109072231|ref|XP_001090687.1| PREDICTED: similar to CG8991-PA [Macaca mulatta]
0.0 [1..224] [1..224]
SOBP_MOUSE - Sine oculis-binding protein homolog OS=Mus musculus GN=Sobp PE=1 SV=1
0.0 [1..224] [1..224]
gi|76625774 - gi|76625774|ref|XP_617598.2| PREDICTED: similar to CG8991-PA [Bos taurus]
0.0 [32..224] [5..197]
gi|50744620 - gi|50744620|ref|XP_419803.1| PREDICTED: similar to RIKEN cDNA 5330439J01 [Gallus gallus]
9.0E-99 [32..224] [82..274]
gi|73973965 - gi|73973965|ref|XP_854946.1| PREDICTED: similar to CG8991-PA [Canis familiaris]
4.0E-82 [32..194] [45..207]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEMEKEGRP PENKRSRKPA HPVKREINEE MKNFAENTMN ELLGWYGYDK VELKDGEDIE  60
   61 FRSYPTDGES RQHISVLKEN SLPKPKLPED SVISPYNIST GYSGLATGNG LSDSPAGSKD 120
  121 HGSVPIIVPL IPPPFIKPPA ED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVSNVQIMCA WCQKVGIKRY SLSMGSEVKS FCSEKCFAAC RRAYFKRNKA RDEDGHAENF  60
   61 PQQHYAKETP RLAFKNNCEL LVRITYLQQV 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.957
Match: 1vfiA
Description: Solution Structure of Vanabin2 (RUH-017), a Vanadium-binding Protein from Ascidia sydneiensis samea
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle