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View Structure Prediction Details

Protein: MPV17
Organism: Homo sapiens
Length: 176 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPV17.

Description E-value Query
Range
Subject
Range
MPV17_RAT - Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
1.0E-51 [1..176] [1..176]
gi|73980664 - gi|73980664|ref|XP_853776.1| PREDICTED: similar to MpV17 transgene, murine homolog, glomeruloscleros...
6.0E-51 [1..176] [112..295]
MPV17_MOUSE - Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=1 SV=1
2.0E-50 [1..175] [1..175]
MPV17_BOVIN - Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
1.0E-49 [1..176] [1..176]
gi|34783266 - gi|34783266|gb|AAH16289.2| MPV17 protein [Homo sapiens]
1.0E-49 [5..176] [1..172]
gi|12324641, gi|... - gi|30695366|ref|NP_564615.3| peroxisomal membrane protein-related [Arabidopsis thaliana], pir||H9656...
8.0E-49 [4..174] [170..339]
MPV17_DANRE - Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
2.0E-48 [3..176] [4..177]
gi|51858973 - gi|51858973|gb|AAH82223.1| Mpv17 protein [Xenopus laevis]
2.0E-48 [3..175] [9..181]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALWRAYQRA LAAHPWKVQV LTAGSLMGLG DIISQQLVER RGLQEHQRGR TLTMVSLGCG  60
   61 FVGPVVGGWY KVLDRFIPGT TKVDALKKML LDQGGFAPCF LGCFLPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGALNGLSAQ DNWAKLQRDY PDALITNYYL WPAVQLANFY LVPLHYRLAV VQCVAVIWNS  60
   61 YLSWKAHRL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.468521
Match: PF04117.3
Description: No description for PF04117.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle