YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|4314286, gi\|1...
Organism:	Homo sapiens
Length:	290 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4314286, gi|1....

Description	E-value	Query Range	Subject Range
gi\|109085043 - gi\|109085043\|ref\|XP_001086418.1\| PREDICTED: similar to nudix -type motif 14 [Macaca mulatta]	1.0E-43	[16..290]	[16..294]
NUD14_MOUSE - Uridine diphosphate glucose pyrophosphatase OS=Mus musculus GN=Nudt14 PE=1 SV=1	5.0E-40	[69..290]	[1..222]
gi\|15156172, gi\|... - gi\|15888474\|ref\|NP_354155.1\| hypothetical protein AGR_C_2106 [Agrobacterium tumefaciens str. C58], g... gi\|25519588 - pir\|\|C97498 hypothetical 21.7K protein in tktB-narQ intergenic region [imported] - Agrobacterium tum...	2.0E-38	[15..288]	[1..252]
NUDT14 - nudix (nucleoside diphosphate linked moiety X)-type motif 14	4.0E-38	[69..290]	[1..222]
gi\|109479992, gi... - gi\|27717381\|ref\|XP_216799.1\| PREDICTED: similar to nudix (nucleoside diphosphate linked moiety X)-ty...	8.0E-38	[69..290]	[1..222]
gi\|114655100 - gi\|114655100\|ref\|XP_001141720.1\| PREDICTED: nudix -type motif 14 [Pan troglodytes]	8.0E-38	[69..290]	[1..222]
NUD14_BOVIN - Uridine diphosphate glucose pyrophosphatase OS=Bos taurus GN=NUDT14 PE=2 SV=1	2.0E-36	[69..290]	[1..222]
gi\|29373950 - gi\|29373950\|emb\|CAD62374.1\| UDP-sugar diphosphatase [Sus scrofa]	1.0E-35	[69..290]	[1..222]
gi\|66043814, gi\|... - gi\|66043814\|ref\|YP_233655.1\| hypothetical protein Psyr_0547 [Pseudomonas syringae pv. syringae B728a...	1.0E-33	[61..289]	[11..213]

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Predicted Domain #1

Region A:
Residues: [1-290]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLLPLPVP GLLLLEAETH PHFPCNHGQE GACTRHARVR AYPGPLVHRR KRPAWLWELA  60
   61 APACPGAAME RIEGASVGRC AASPYLRPLT LHYRQNGAQK SWDFMKTHDS VTVLLFNSSR 120
  121 RSLVLVKQFR PAVYAGEVER RFPGSLAAVD QDGPRELQPA LPGSAGVTVE LCAGLVDQPG 180
  181 LSLEEVACKE AWEECGYHLA PSDLRRVATY WSGVGLTGSR QTMFYTEVTD AQRSGPGGGL 240
  241 VEEGELIEVV HLPLEGAQAF ADDPDIPKTL GVIFGVSWFL SQVAPNLDLQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	29.522879
Match:	1g0sA
Description:	ADP-ribose pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.724329914463007	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: