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View Structure Prediction Details

Protein: CHCHD2
Organism: Homo sapiens
Length: 151 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHCHD2.

Description E-value Query
Range
Subject
Range
gi|46810303, gi|... - gi|46810303|ref|NP_898911.1| hypothetical protein LOC71970 [Mus musculus], gi|26369695|dbj|BAC25301....
4.0E-65 [1..148] [1..150]
gi|109497259, gi... - gi|157786908|ref|NP_001099394.1| SCAN domain containing 3 [Rattus norvegicus], gi|149063159|gb|EDM13...
8.0E-64 [1..148] [1..151]
gi|109130246 - gi|109130246|ref|XP_001089355.1| PREDICTED: similar to transcription factor (p38 interacting protein...
3.0E-46 [9..151] [886..1028]
gi|42542702 - gi|42542702|gb|AAH66331.1| CHCHD2 protein [Homo sapiens]
2.0E-44 [1..151] [1..151]
gi|114613535 - gi|114613535|ref|XP_519108.2| PREDICTED: similar to 16.7Kd protein isoform 4 [Pan troglodytes]
3.0E-44 [1..149] [1..149]

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Predicted Domain #1
Region A:
Residues: [1-44]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRGSRSRTS RMAPPASRAP QMRAAPRPAP VAQPPAAAPP SAVG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [45-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSAAAPRQPG LMAQMATTAA GVAVGSAVGH TLGHAITGGF SGGSNAEPAR PDITYQEPQG  60
   61 TQPAQQQQPC LYEIKQFLEC AQNQGDIKLC EGFNEVLKQC RLANGLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 2i47A
Description: No description for 2i47A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle