YRC Public Data Repository - Protein Structure Prediction

Protein:	KRT31
Organism:	Homo sapiens
Length:	416 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRT31.

Description	E-value	Query Range	Subject Range
gi\|73996557 - gi\|73996557\|ref\|XP_850166.1\| PREDICTED: similar to keratin, hair, basic, 3 [Canis familiaris]	3.0E-63	[4..414]	[153..570]
gi\|109481333 - gi\|109481333\|ref\|XP_001064779.1\| PREDICTED: similar to keratin Kb40 [Rattus norvegicus]	8.0E-62	[6..390]	[205..589]
gi\|109096771 - gi\|109096771\|ref\|XP_001093676.1\| PREDICTED: keratin, hair, basic, 4 [Macaca mulatta]	1.0E-61	[13..413]	[125..532]
KRT84 - keratin 84	1.0E-60	[13..410]	[125..532]
gi\|114644580 - gi\|114644580\|ref\|XP_522389.2\| PREDICTED: keratin, hair, basic, 4 [Pan troglodytes]	8.0E-60	[13..413]	[125..532]
KRT81_BOVIN - Keratin, type II cuticular Hb1 OS=Bos taurus GN=KRT81 PE=2 SV=1	2.0E-59	[2..414]	[47..474]

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Predicted Domain #1

Region A:
Residues: [1-416]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYNFCLPSL SCRTSCSSRP CVPPSCHSCT LPGACNIPAN VSNCNWFCEG SFNGSEKETM  60
   61 QFLNDRLASY LEKVRQLERD NAELENLIRE RSQQQEPLLC PSYQSYFKTI EELQQKILCT 120
  121 KSENARLVVQ IDNAKLAADD FRTKYQTELS LRQLVESDIN GLRRILDELT LCKSDLEAQV 180
  181 ESLKEELLCL KSNHEQEVNT LRCQLGDRLN VEVDAAPTVD LNRVLNETRS QYEALVETNR 240
  241 REVEQWFTTQ TEELNKQVVS SSEQLQSYQA EIIELRRTVN ALEIELQAQH NLRDSLENTL 300
  301 TESEARYSSQ LSQVQSLITN VESQLAEIRS DLERQNQEYQ VLLDVRARLE CEINTYRSLL 360
  361 ESEDCNLPSN PCATTNACSK PIGPCLSNPC TSCVPPAPCT PCAPRPRCGP CNSFVR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.09691
Match:	1i84S
Description:	Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits