YRC Public Data Repository - Protein Structure Prediction

Protein:	TIMM22
Organism:	Homo sapiens
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIMM22.

Description	E-value	Query Range	Subject Range
gi\|6760457 - gi\|6760457\|gb\|AAF28360.1\|AF223951_1 TIM22 preprotein translocase [Rattus norvegicus]	2.0E-49	[5..194]	[1..190]
gi\|53733686 - gb\|AAH84024.1\| Unknown (protein for MGC:98207) [Xenopus laevis] TIM22_MOUSE - Mitochondrial import inner membrane translocase subunit Tim22 OS=Mus musculus GN=Timm22 PE=1 SV=1	1.0E-46	[1..194]	[1..194]
gi\|114665566 - gi\|114665566\|ref\|XP_001153337.1\| PREDICTED: hypothetical protein [Pan troglodytes]	2.0E-46	[1..194]	[1..194]
gi\|57091309 - gi\|57091309\|ref\|XP_537758.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	5.0E-46	[3..194]	[2..193]
gi\|7019553, gi\|5... - ref\|NP_037469.1\| translocase of inner mitochondrial membrane 22 (yeast) homolog [Homo sapiens], gi\|...	7.0E-46	[1..194]	[1..194]
TIM22_XENTR - Mitochondrial import inner membrane translocase subunit Tim22 OS=Xenopus tropicalis GN=timm22 PE=2 S...	4.0E-45	[10..194]	[2..186]
gi\|50758268 - gi\|50758268\|ref\|XP_415839.1\| PREDICTED: similar to TIM22 preprotein translocase [Gallus gallus]	2.0E-44	[1..194]	[108..308]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAPNAGG SAPETAGSAE APLQYSLLLQ YLVGDKRQPR LLEPGSLGGI PSPAKSEEQK  60
   61 MIEKAMESCA FKAALACVGG FVLGGAFGVF TAGIDTNVGF DPKDPYRTPT AKEVLKDMGQ 120
  121 RGMSYAKNFA IVGAMFSCTE CLIESYRGTS DWKNSVISGC ITGGAIGFRA GLKAGAIGCG 180
  181 GFAAFSAAID YYLR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	36.79588
Match:	PF02466.10
Description:	No description for PF02466.10 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits