YRC Public Data Repository - Protein Structure Prediction

Protein:	UTP11L
Organism:	Homo sapiens
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP11L.

Description	E-value	Query Range	Subject Range
gi\|197101757 - gi\|197101757\|ref\|NP_001126408.1\| UTP11-like, U3 small nucleolar ribonucleoprotein [Pongo abelii] gi\|55731348 - gi\|55731348\|emb\|CAH92388.1\| hypothetical protein [Pongo abelii]	1.0E-69	[1..253]	[1..253]
UTP11_RAT - Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11l PE=2 SV=1	5.0E-69	[1..253]	[1..253]
gi\|55586846 - gi\|55586846\|ref\|XP_513332.1\| PREDICTED: UTP11-like, U3 small nucleolar ribonucleoprotein, [Pan trogl...	6.0E-69	[1..253]	[1..253]
UTP11_MOUSE - Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11l PE=2 SV=1	9.0E-69	[1..253]	[1..253]
gi\|4929657, gi\|7... - gi\|7705809\|ref\|NP_057121.1\| UTP11-like, U3 small nucleolar ribonucleoprotein [Homo sapiens], gi\|4929...	1.0E-68	[1..253]	[1..253]
gi\|76614468 - gi\|76614468\|ref\|XP_617852.2\| PREDICTED: similar to UTP11-like, U3 small nucleolar ribonucleoprotein,...	1.0E-66	[1..253]	[1..253]
gi\|57096574 - gi\|57096574\|ref\|XP_532552.1\| PREDICTED: similar to Probable U3 small nucleolar RNA-associated protei...	2.0E-64	[1..253]	[1..253]
gi\|31209297, gi\|... - gi\|31209297\|ref\|XP_313615.1\| ENSANGP00000013368 [Anopheles gambiae str. PEST], gi\|30176757\|gb\|EAA091... AGAP004336-PA - UTP11-like, U3 small nucleolar ribonucleoprotein\|protein_coding\|2R:54821708:54822466:1\|gene:AGAP0043...	1.0E-62	[3..253]	[2..252]
gi\|50759728 - gi\|50759728\|ref\|XP_417753.1\| PREDICTED: hypothetical protein [Gallus gallus]	4.0E-61	[1..253]	[1..253]

Back

Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAFRKAAK SRQREHRERS QPGFRKHLGL LEKKKDYKLR ADDYRKKQEY LKALRKKALE  60
   61 KNPDEFYYKM TRVKLQDGVH IIKETKEEVT PEQLKLMRTQ DVKYIEMKRV AEAKKIERLK 120
  121 SELHLLDFQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [130-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKQQNKHVFF FDTKKEVEQF DVATHLQTAP ELVDRVFNRP RIETLQKEKV KGVTNQTGLK  60
   61 RIAKERQKQY NCLTQRIERE KKLFVIAQKI QTRKDLMDKT QKVKVKKETV NSPAIYKFQS 120
  121 RRKR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits