YRC Public Data Repository - Protein Structure Prediction

Protein:	PGM3
Organism:	Homo sapiens
Length:	542 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGM3.

Description	E-value	Query Range	Subject Range
gi\|109071858, gi... - gi\|109071860\|ref\|XP_001083518.1\| PREDICTED: phosphoglucomutase 3 isoform 3 [Macaca mulatta], gi\|1090...	0.0	[1..542]	[1..542]
gi\|9229879, gi\|1... - gi\|9229879\|dbj\|BAB00613.1\| phosphoacetylglucosamine mutase [Homo sapiens], gi\|12654831\|gb\|AAH01258.1...	0.0	[1..542]	[1..542]
gi\|114608269, gi... - gi\|114608269\|ref\|XP_001149456.1\| PREDICTED: phosphoglucomutase 3 isoform 3 [Pan troglodytes], gi\|114...	0.0	[1..542]	[1..542]
gi\|74139566 - gi\|74139566\|dbj\|BAE40920.1\| unnamed protein product [Mus musculus]	0.0	[1..542]	[1..542]
gi\|109485096, gi... - gi\|187469167\|gb\|AAI66838.1\| Pgm3 protein [Rattus norvegicus], gi\|149018988\|gb\|EDL77629.1\| phosphoglu...	0.0	[1..542]	[1..542]
gi\|57094620 - gi\|57094620\|ref\|XP_532216.1\| PREDICTED: similar to Phosphoacetylglucosamine mutase (PAGM) (Acetylglu...	0.0	[1..542]	[1..542]

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Predicted Domain #1

Region A:
Residues: [1-542]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLGAITKYS ALHAKPNGLI LQYGTAGFRT KAEHLDHVMF RMGLLAVLRS KQTKSTIGVM  60
   61 VTASHNPEED NGVKLVDPLG EMLAPSWEEH ATCLANAEEQ DMQRVLIDIS EKEAVNLQQD 120
  121 AFVVIGRDTR PSSEKLSQSV IDGVTVLGGQ FHDYGLLTTP QLHYMVYCRN TGGRYGKATI 180
  181 EGYYQKLSKA FVELTKQASC SGDEYRSLKV DCANGIGALK LREMEHYFSQ GLSVQLFNDG 240
  241 SKGKLNHLCG ADFVKSHQKP PQGMEIKSNE RCCSFDGDAD RIVYYYHDAD GHFHLIDGDK 300
  301 IATLISSFLK ELLVEIGESL NIGVVQTAYA NGSSTRYLEE VMKVPVYCTK TGVKHLHHKA 360
  361 QEFDIGVYFE ANGHGTALFS TAVEMKIKQS AEQLEDKKRK AAKMLENIID LFNQAAGDAI 420
  421 SDMLVIEAIL ALKGLTVQQW DALYTDLPNR QLKVQVADRR VISTTDAERQ AVTPPGLQEA 480
  481 INDLVKKYKL SRAFVRPSGT EDVVRVYAEA DSQESADHLA HEVSLAVFQL AGGIGERPQP 540
  541 GF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	90.69897
Match:	2dkaA
Description:	No description for 2dkaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits