| Protein: | ATXN10 |
| Organism: | Homo sapiens |
| Length: | 475 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATXN10.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..475] | [1..475] |
|
|
0.0 | [1..475] | [1..475] |
|
|
0.0 | [1..475] | [1..475] |
|
|
0.0 | [1..475] | [1..476] |
|
|
0.0 | [1..474] | [1..474] |
|
|
0.0 | [1..474] | [1..474] |
|
|
0.0 | [31..475] | [6..450] |
|
Region A: Residues: [1-475] |
1 11 21 31 41 51
| | | | | |
1 MAAPRPPPAR LSGVMVPAPI QDLEALRALT ALFKEQRNRE TAPRTIFQRV LDILKKSSHA 60
61 VELACRDPSQ VENLASSLQL ITECFRCLRN ACIECSVNQN SIRNLDTIGV AVDLILLFRE 120
121 LRVEQESLLT AFRCGLQFLG NIASRNEDSQ SIVWVHAFPE LFLSCLNHPD KKIVAYSSMI 180
181 LFTSLNHERM KELEENLNIA IDVIDAYQKH PESEWPFLII TDLFLKSPEL VQAMFPKLNN 240
241 QERVTLLDLM IAKITSDEPL TKDDIPVFLR HAELIASTFV DQCKTVLKLA SEEPPDDEEA 300
301 LATIRLLDVL CEMTVNTELL GYLQVFPGLL ERVIDLLRVI HVAGKETTNI FSNCGCVRAE 360
361 GDISNVANGF KSHLIRLIGN LCYKNKDNQD KVNELDGIPL ILDNCNISDS NPFLTQWVIY 420
421 AIRNLTEDNS QNQDLIAKME EQGLADASLL KKVGFEVEKK GEKLILKSTR DTPKP
|
| Detection Method: |  |
| Confidence: | 1.57 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.88418925237229 | bayes_pls_golite062009 |
| protein binding | 1.63424405980235 | bayes_pls_golite062009 |
