YRC Public Data Repository - Protein Structure Prediction

Protein:	PIGL
Organism:	Homo sapiens
Length:	252 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIGL.

Description	E-value	Query Range	Subject Range
gi\|50198821, gi\|... - gi\|79315492\|ref\|NP_001030882.1\| N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related [Ar...	4.0E-69	[1..252]	[1..255]
PIGL_MOUSE - N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Mus musculus GN=Pigl PE=2 SV=1	2.0E-67	[1..252]	[1..252]
PIGL_RAT - N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Rattus norvegicus GN=Pigl PE=2 SV=1	2.0E-67	[1..252]	[1..252]
gi\|215701450, gi... - gi\|50929667\|ref\|XP_474361.1\| OSJNBb0017I01.2 [Oryza sativa (japonica cultivar-group)], gi\|32487388\|e...	2.0E-59	[1..252]	[1..262]
gi\|57086435 - gi\|57086435\|ref\|XP_536652.1\| PREDICTED: similar to N-acetylglucosaminyl-phosphatidylinositol de-N-ac...	6.0E-58	[16..252]	[126..362]
FBpp0310553, CG4... - This gene is referred to in FlyBase by the symbol Dmel\CG4433 (CG4433, FBgn0038763). It is a protein...	1.0E-55	[17..252]	[117..351]
gi\|109113449 - gi\|109113449\|ref\|XP_001088273.1\| PREDICTED: phosphatidylinositol glycan, class L [Macaca mulatta]	3.0E-55	[1..252]	[1..256]

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Predicted Domain #1

Region A:
Residues: [1-252]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMWLLCVA LAVLAWGFLW VWDSSERMKS REQGGRLGAE SRTLLVIAHP DDEAMFFAPT  60
   61 VLGLARLRHW VYLLCFSAGN YYNQGETRKK ELLQSCDVLG IPLSSVMIID NRDFPDDPGM 120
  121 QWDTEHVARV LLQHIEVNGI NLVVTFDAGG VSGHSNHIAL YAAVRALHSE GKLPKGCSVL 180
  181 TLQSVNVLRK YISLLDLPLS LLHTQDVLFV LNSKEVAQAK KAMSCHRSQL LWFRRLYIIF 240
  241 SRYMRINSLS FL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.69897
Match:	2ixdA
Description:	No description for 2ixdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits