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View Structure Prediction Details

Protein: DOK5
Organism: Homo sapiens
Length: 306 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOK5.

Description E-value Query
Range
Subject
Range
DOK5_MOUSE - Docking protein 5 OS=Mus musculus GN=Dok5 PE=1 SV=1
9.0E-86 [1..306] [1..306]
gi|109091551 - gi|109091551|ref|XP_001091477.1| PREDICTED: docking protein 5 isoform 1 [Macaca mulatta]
1.0E-85 [1..306] [1..306]
gi|157819193, gi... - gi|187469633|gb|AAI67027.1| Similar to Docking protein 5 (Downstream of tyrosine kinase 5) (Protein ...
2.0E-85 [1..306] [1..306]
gi|114682715 - gi|114682715|ref|XP_001169624.1| PREDICTED: docking protein 5 isoform 2 [Pan troglodytes]
4.0E-84 [1..306] [1..307]
gi|7672347 - gi|7672347|gb|AAF66443.1|AF132732_1 unknown [Homo sapiens]
2.0E-81 [1..306] [1..306]
gi|50758979 - gi|50758979|ref|XP_417502.1| PREDICTED: similar to Docking protein 5 (Downstream of tyrosine kinase ...
3.0E-81 [1..306] [1..327]
gi|115495301, gi... - gi|115495301|ref|NP_001069407.1| docking protein 5 [Bos taurus], gi|111304913|gb|AAI20042.1| Docking...
3.0E-81 [1..306] [1..306]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNFNDIVK QGYVRIRSRR LGIYQRCWLV FKKASSKGPK RLEKFSDERA AYFRCYHKVT  60
   61 ELNNVKNVAR LPKSTKKHAI GIYFNDDTSK TFACESDLEA DEWCKVLQME CVGTRINDIS 120
  121 LGEPDLLATG VE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1wg7A
Description: Solution structure of pleckstrin homology domain from human KIAA1058 protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.38944296108213 bayes_pls_golite062009
protein binding 1.8661085728568 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase signaling protein activity 0.577807513305932 bayes_pls_golite062009
receptor signaling protein activity 0.25947065822274 bayes_pls_golite062009
insulin receptor binding 0.242371008010579 bayes_pls_golite062009
receptor binding 0.217665221914025 bayes_pls_golite062009
GTPase regulator activity 0.0628553386056759 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.0385577214695162 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [133-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REQSERFNVY LMPSPNLDVH GECALQITYE YICLWDVQNP RVKLISWPLS ALRRYGRDTT  60
   61 WFTFEAGRMC ETGEGLFIFQ TRDGEAIYQK VHSAALAIAE QHERLLQSVK NSMLQMKMSE 120
  121 RAASLSTMVP LPRSAYWQHI TRQHSTGQLY RLQDVSSPLK LHRTETFPAY RSEH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 1j0wA
Description: Crystal Structure Analysis of the Dok-5 PTB Domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.38944296108213 bayes_pls_golite062009
protein binding 1.8661085728568 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase signaling protein activity 0.577807513305932 bayes_pls_golite062009
receptor signaling protein activity 0.25947065822274 bayes_pls_golite062009
insulin receptor binding 0.242371008010579 bayes_pls_golite062009
receptor binding 0.217665221914025 bayes_pls_golite062009
GTPase regulator activity 0.0628553386056759 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.0385577214695162 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle