| Protein: | gi|41150277 |
| Organism: | Homo sapiens |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|41150277.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-50 | [1..304] | [1..304] |
|
|
6.0E-50 | [1..302] | [1..302] |
|
|
7.0E-50 | [1..304] | [1..304] |
|
|
9.0E-50 | [1..302] | [1..302] |
|
|
3.0E-49 | [1..302] | [1..302] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MSKSESPKEP EQLRKLFIGG LSFETTDESL RSHFEQWGTL TDCVVMRDPN TKRSRGFGFV 60
61 TYATVEEVDA AMNARPHKVD GRVVEPKRAV SREDSQRPDA HLTVKKIFVG GIKEDTEEHH 120
121 LRDYFEQYGK IEVIEIMTDR GSGKKRGFAF VTFDDHDSVD KIVIQKYHTV NGHNCEVRKA 180
181 LSKQEMASAS SSQRGR
|
| Detection Method: |  |
| Confidence: | 44.522879 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [197-320] |
1 11 21 31 41 51
| | | | | |
1 SGSGNFGGGR GGGFGGNDNF GRGGNFSGRG GFGGSRGGGG YGGSGDGYNG FGNDGSNFGG 60
61 GGSYNDFGNY NNQSSNFGPM KGGNFEGRSS GPHGGGGQYF AKPRNQGGYG GSSSSSSYGS 120
121 GRRF
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
