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View Structure Prediction Details

Protein: CSN2
Organism: Homo sapiens
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN2.

Description E-value Query
Range
Subject
Range
CASB_PIG - Beta-casein OS=Sus scrofa GN=CSN2 PE=1 SV=1
9.0E-36 [1..224] [1..232]
CASB_CAMDR - Beta-casein OS=Camelus dromedarius GN=CSN2 PE=1 SV=1
8.0E-34 [1..220] [1..230]
gi|477187 - gi|477187|pir||A48384 beta-casein - pig
1.0E-33 [1..224] [1..232]
gi|15425980 - gi|15425980|gb|AAK97639.1| beta-casein precursor [Capra hircus]
3.0E-33 [1..212] [1..219]
CASB_BUBBU - Beta-casein OS=Bubalus bubalis GN=CSN2 PE=2 SV=1
5.0E-32 [9..212] [18..221]
CASB_HORSE - Beta-casein OS=Equus caballus GN=CSN2 PE=1 SV=3
9.0E-32 [10..226] [19..241]
CASB_BOVIN - Beta-casein OS=Bos taurus GN=CSN2 PE=1 SV=2
2.0E-31 [9..212] [18..221]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLILACLV ALALARETIE SLSSSEESIT EYKQKVEKVK HEDQQQGEDE HQDKIYPSFQ  60
   61 PQPLIYPFVE PIPYGFLPQN ILPLAQPAVV LPVPQPEIME VPKAKDTVYT KGRVMPVLKS 120
  121 PTIPFFDPQI PKLTDLENLH LPLPL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.996
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [146-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQPLMQQVPQ PIPQTLALPP QPLWSVPQPK VLPIPQQVVP YPQRAVPVQA LLLNQELLLN  60
   61 PTHQIYPVTQ PLAPVHNPIS V

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.823909
Match: PF00363.9
Description: No description for PF00363.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle