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View Structure Prediction Details

Protein: gi|51555762, gi|...
Organism: Homo sapiens
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51555762, gi|....

Description E-value Query
Range
Subject
Range
gi|114666699, gi... - gi|114666701|ref|XP_001142572.1| PREDICTED: acyl-Coenzyme A binding domain containing 4 isoform 5 [P...
0.0 [1..341] [1..341]
ACBD4_RAT - Acyl-CoA-binding domain-containing protein 4 OS=Rattus norvegicus GN=Acbd4 PE=1 SV=1
2.0E-95 [1..294] [1..302]
gi|30794460, gi|... - gi|30794460|ref|NP_080264.1| acyl-Coenzyme A binding domain containing 4 isoform 1 [Mus musculus], g...
6.0E-91 [1..294] [1..305]
gi|20810544, gi|... - gi|209364592|ref|NP_001129177.1| acyl-Coenzyme A binding domain containing 4 isoform 2 [Homo sapiens...
7.0E-91 [1..294] [1..281]
gi|109116301 - gi|109116301|ref|XP_001115247.1| PREDICTED: similar to acyl-Coenzyme A binding domain containing 4 [...
1.0E-85 [1..294] [1..278]
ACBD4_BOVIN - Acyl-CoA-binding domain-containing protein 4 OS=Bos taurus GN=ACBD4 PE=2 SV=1
5.0E-79 [1..294] [1..279]
gi|73965478 - gi|73965478|ref|XP_548051.2| PREDICTED: similar to acyl-Coenzyme A binding domain containing 4 isofo...
8.0E-79 [1..294] [1..276]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEKESPEP DCQKQFQAAV SVIQNLPKNG SYRPSYEEML RFYSYYKQAT MGPCLVPRPG  60
   61 FWDPIGRYKW DAWNSLGKMS REEAMSAYIT EMKLVAQKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 2fdqA
Description: No description for 2fdqA was found.

Predicted Domain #2
Region A:
Residues: [100-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IDTVPLGEVA EDMFGYFEPL YQVIPDMPRP PETFLRRVTG WKEQVVNGDV GAVSEPPCLP  60
   61 KEPAPPSPAS LWAVTLPTPP QSPIHPGTWT PRFSVIPWSS WSLSWFGQSS GQHLEESVIP 120
  121 GTAPCPPQRK RG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CGAARRGPRS WTCGCWGQFE HYRRACRRCR RGCRAWRACP GPLSRGRSPG PVLGHGPLGS  60
   61 RGPRCSSSSC GPSSSSGSSE CFGPKRGDCQ WRGLCSQLRL SCCALSLPRV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle