YRC Public Data Repository - Protein Structure Prediction

Protein:	NT5C2
Organism:	Homo sapiens
Length:	561 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NT5C2.

Description	E-value	Query Range	Subject Range
5NTC_MOUSE - Cytosolic purine 5'-nucleotidase OS=Mus musculus GN=Nt5c2 PE=1 SV=2	0.0	[1..548]	[1..548]
5NTC_BOVIN - Cytosolic purine 5'-nucleotidase OS=Bos taurus GN=NT5C2 PE=1 SV=1	0.0	[1..548]	[1..548]
gi\|73998443 - gi\|73998443\|ref\|XP_535002.2\| PREDICTED: similar to Cytosolic purine 5-nucleotidase (5-nucleotidase c...	0.0	[1..548]	[1..548]
gi\|114632612, gi... - gi\|114632620\|ref\|XP_001172551.1\| PREDICTED: 5'-nucleotidase, cytosolic II isoform 10 [Pan troglodyte...	0.0	[1..548]	[1..548]
5NTC_CHICK - Cytosolic purine 5'-nucleotidase OS=Gallus gallus GN=NT5C2 PE=2 SV=1	0.0	[1..548]	[1..548]

Back

Predicted Domain #1

Region A:
Residues: [1-561]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSWSDRLQ NAADMPANMD KHALKKYRRE AYHRVFVNRS LAMEKIKCFG FDMDYTLAVY  60
   61 KSPEYESLGF ELTVERLVSI GYPQELLSFA YDSTFPTRGL VFDTLYGNLL KVDAYGNLLV 120
  121 CAHGFNFIRG PETREQYPNK FIQRDDTERF YILNTLFNLP ETYLLACLVD FFTNCPRYTS 180
  181 CETGFKDGDL FMSYRSMFQD VRDAVDWVHY KGSLKEKTVE NLEKYVVKDG KLPLLLSRMK 240
  241 EVGKVFLATN SDYKYTDKIM TYLFDFPHGP KPGSSHRPWQ SYFDLILVDA RKPLFFGEGT 300
  301 VLRQVDTKTG KLKIGTYTGP LQHGIVYSGG SSDTICDLLG AKGKDILYIG DHIFGDILKS 360
  361 KKRQGWRTFL VIPELAQELH VWTDKSSLFE ELQSLDIFLA ELYKHLDSSS NERPDISSIQ 420
  421 RRIKKVTHDM DMCYGMMGSL FRSGSRQTLF ASQVMRYADL YAASFINLLY YPFSYLFRAA 480
  481 HVLMPHESTV EHTHVDINEM ESPLATRNRT SVDFKDTDYK RHQLTRSISE IKPPNLFPLA 540
  541 PQEITHCHDE DDDEEEEEEE E

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2j2cA
Description:	No description for 2j2cA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits