YRC Public Data Repository - Protein Structure Prediction

Protein:	TBC1D7
Organism:	Homo sapiens
Length:	293 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBC1D7.

Description	E-value	Query Range	Subject Range
gi\|3511223, gi\|9... - gi\|9755639\|emb\|CAC01792.1\| plant adhesion molecule 1 (PAM1) [Arabidopsis thaliana], gi\|3511223\|gb\|AA...	3.0E-58	[3..282]	[32..328]
gi\|68357830 - gi\|68357830\|ref\|XP_684364.1\| PREDICTED: similar to TBC1 domain family, member 10B [Danio rerio]	6.0E-57	[23..281]	[294..566]
gi\|109506156 - gi\|109506156\|ref\|XP_001070749.1\| PREDICTED: similar to USP6 N-terminal-like protein [Rattus norvegic...	6.0E-56	[15..265]	[146..406]
TBCD7_MOUSE - TBC1 domain family member 7 OS=Mus musculus GN=Tbc1d7 PE=1 SV=1	9.0E-56	[1..293]	[1..293]
gi\|114605521, gi... - gi\|55625872\|ref\|XP_518243.1\| PREDICTED: TBC1 domain family, member 7 isoform 13 [Pan troglodytes], g...	9.0E-56	[1..293]	[1..293]
gi\|57110228 - gi\|57110228\|ref\|XP_535890.1\| PREDICTED: similar to TBC1 domain family, member 7 isoform 1 [Canis fam...	1.0E-55	[1..293]	[1..293]
gi\|62898451 - gi\|62898451\|dbj\|BAD97165.1\| TBC1 domain family, member 7 variant [Homo sapiens]	2.0E-55	[1..293]	[1..293]

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Predicted Domain #1

Region A:
Residues: [1-293]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEDSQRNFR SVYYEKVGFR GVEEKKSLEI LLKDDRLDTE KLCTFSQRFP LPSMYRALVW  60
   61 KVLLGILPPH HESHAKVMMY RKEQYLDVLH ALKVVRFVSD ATPQAEVYLR MYQLESGKLP 120
  121 RSPSFPLEPD DEVFLAIAKA MEEMVEDSVD CYWITRRFVN QLNTKYRDSL PQLPKAFEQY 180
  181 LNLEDGRLLT HLRMCSAAPK LPYDLWFKRC FAGCLPESSL QRVWDKVVSG SCKILVFVAV 240
  241 EILLTFKIKV MALNSAEKIT KFLENIPQDS SDAIVSKAID LWHKHCGTPV HSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.522879
Match:	2qfzA
Description:	No description for 2qfzA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits