| Protein: | VAPA |
| Organism: | Homo sapiens |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAPA.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-76 | [1..242] | [1..242] |
|
|
3.0E-75 | [1..242] | [1..242] |
|
|
7.0E-75 | [1..242] | [8..249] |
|
|
1.0E-73 | [1..242] | [8..249] |
|
|
2.0E-73 | [1..242] | [1..242] |
|
|
1.0E-72 | [1..242] | [8..249] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MAKHEQILVL DPPTDLKFKG PFTDVVTTNL KLRNPSDRKV CFKVKTTAPR RYCVRPNSGI 60
61 IDPGSTVTVS VMLQPFDYDP NEKSKHKFMV QTIFAPPNTS DMEAVWKEAK PDELMDSKLR 120
121 CVFEMPNEND KLNDMEPSKA
|
| Detection Method: |  |
| Confidence: | 40.09691 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-242] |
1 11 21 31 41 51
| | | | | |
1 VPLNASKQDG PMPKPHSVSL NDTETRKLME ECKRLQGEMM KLSEENRHLR DEGLRLRKVA 60
61 HSDKPGSTST ASFRDNVTSP LPSLLVVIAA IFIGFFLGKF IL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
