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View Structure Prediction Details

Protein: TMEM111
Organism: Homo sapiens
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMEM111.

Description E-value Query
Range
Subject
Range
EMC3_RAT - ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3
EMC3_MOUSE - ER membrane protein complex subunit 3 OS=Mus musculus GN=Emc3 PE=1 SV=3
433.0 [0..1] [261..1]
EMC3_BOVIN - ER membrane protein complex subunit 3 OS=Bos taurus GN=EMC3 PE=2 SV=3
432.0 [0..1] [261..1]
gi|50754191 - gi|50754191|ref|XP_414280.1| PREDICTED: hypothetical protein [Gallus gallus]
424.0 [0..1] [261..1]
gi|56673106 - gi|56673106|gb|AAW19648.1| 30kDa protein [Danio rerio]
424.0 [0..1] [261..1]
gi|47229601 - gi|47229601|emb|CAG06797.1| unnamed protein product [Tetraodon nigroviridis]
421.0 [0..1] [261..1]
gi|62858123 - gi|62858123|ref|NP_001016907.1| partial optokinetic response b [Xenopus (Silurana) tropicalis]
416.0 [0..1] [261..1]
gi|147904527, gi... - gi|56270439|gb|AAH87323.1| LOC495954 protein [Xenopus laevis], gi|147904527|ref|NP_001088690.1| hypo...
391.0 [0..1] [248..1]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPELLLDS NIRLWVVLPI VIITFFVGMI RHYVSILLQS DKKLTQEQVS DSQVLIRSRV  60
   61 LRENGKYIPK QSFLTRKYYF NNPEDGFFKK TKRKVVPPSP MTDPTMLTDM MKGNVTNVLP 120
  121 MILIGGWINM TFSGFVTTKV PFPLTLRFKP MLQQGIELLT LDASWVSSAS WYFLNVFGLR 180
  181 SIYSLIL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [188-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQDNAADQSR MMQEQMTGAA MAMPADTNKA FKTEWEALEL TDHQWALDDV EEELMAKDLH  60
   61 FEGMFKKELQ TSIF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.911 N/A N/A a.24.18 Description not found.
View Download 0.834 N/A N/A a.29.13 Description not found.
View Download 0.754 N/A N/A a.8.11 Description not found.
View Download 0.747 N/A N/A a.8.11 Description not found.
View Download 0.741 N/A N/A a.8.11 Description not found.
View Download 0.700 N/A N/A a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.639 N/A N/A f.17.1 F1F0 ATP synthase subunit C
View Download 0.580 N/A N/A a.64.1 Saposin


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