| Protein: | HAMP |
| Organism: | Homo sapiens |
| Length: | 84 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAMP.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-25 | [1..84] | [1..84] |
|
|
5.0E-25 | [1..84] | [1..84] |
|
|
6.0E-25 | [1..84] | [1..84] |
|
|
8.0E-24 | [1..84] | [1..84] |
|
|
5.0E-20 | [1..84] | [1..83] |
|
|
1.0E-17 | [1..84] | [1..82] |
|
|
2.0E-15 | [1..84] | [1..82] |
|
|
3.0E-13 | [1..84] | [1..84] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MALSSQIWAA CLLLLLLLAS LTSGSVFPQQ TGQLAELQPQ DRAGARASWM PMFQRRRRRD 60
61 THFPICIFCC GCCHRSKCGM CCKT
|
| Detection Method: |  |
| Confidence: | 62.638272 |
| Match: | PF06446.3 |
| Description: | No description for PF06446.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.359 | N/A | N/A | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.337 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.328 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.319 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.290 | N/A | N/A | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
