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View Structure Prediction Details

Protein: MRPL15
Organism: Homo sapiens
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL15.

Description E-value Query
Range
Subject
Range
gi|12052854, gi|... - gi|49065488|emb|CAG38562.1| MRPL15 [Homo sapiens], gi|12052854|emb|CAB66600.1| hypothetical protein ...
HGNC:14054|MIM:6... - ribosomal protein L15
gi|117644752 - gi|117644752|emb|CAL37842.1| hypothetical protein [synthetic construct]
0.0 [1..296] [1..296]
gi|73999382 - gi|73999382|ref|XP_535072.2| PREDICTED: similar to mitochondrial ribosomal protein L15 [Canis famili...
0.0 [1..296] [1..296]
RM15_MOUSE - 39S ribosomal protein L15, mitochondrial OS=Mus musculus GN=Mrpl15 PE=1 SV=1
7.0E-98 [1..296] [1..295]
RM15_BOVIN - 39S ribosomal protein L15, mitochondrial OS=Bos taurus GN=MRPL15 PE=1 SV=1
2.0E-96 [1..296] [1..297]
gi|62648573, gi|... - gi|62648573|ref|XP_216323.3| PREDICTED: similar to mitochondrial ribosomal protein L15 [Rattus norve...
1.0E-95 [1..296] [1..295]
gi|109086417 - gi|109086417|ref|XP_001082976.1| PREDICTED: similar to mitochondrial ribosomal protein L15 [Macaca m...
9.0E-94 [53..296] [90..333]
RM15_XENLA - 39S ribosomal protein L15, mitochondrial OS=Xenopus laevis GN=mrpl15 PE=2 SV=1
3.0E-90 [3..296] [2..296]
RM15_CHICK - 39S ribosomal protein L15, mitochondrial OS=Gallus gallus GN=MRPL15 PE=2 SV=1
3.0E-89 [12..296] [12..297]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPLQGGGA RALDLLRGLP RVSLANLKPN PGSKKPERRP RGRRRGRKCG RGHKGERQRG  60
   61 TRPRLGFEGG QTPFYIRIPK YGFNEGHSFR RQYKPLSLNR LQYLIDLGRV DPSQPIDLTQ 120
  121 LVNGRGVTIQ PLKRDYGVQL VEEGADTFTA KVNIEVQLAS ELAIAAIEKN GGVVTTAFY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1p85J
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.4893803036544 bayes_pls_golite062009
structural molecule activity 8.91740015840503 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [180-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPRSLDIVCK PVPFFLRGQP IPKRMLPPEE LVPYYTDAKN RGYLADPAKF PEARLELARK  60
   61 YGYILPDITK DELFKMLCTR KDPRQIFFGL APGWVVNMAD KKILKPTDEN LLKYYTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle