YRC Public Data Repository - Protein Structure Prediction

Protein:	FUT1
Organism:	Homo sapiens
Length:	365 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUT1.

Description	E-value	Query Range	Subject Range
FUT1_SAPAP - Galactoside 2-alpha-L-fucosyltransferase 1 OS=Sapajus apella GN=FUT1 PE=3 SV=1	0.0	[1..365]	[1..366]
gi\|28566422 - gi\|28566422\|gb\|AAO43090.1\| alpha(1,2)fucosyltransferase [Chiropotes satanas]	0.0	[1..365]	[1..366]
gi\|28566424 - gi\|28566424\|gb\|AAO43091.1\| alpha(1,2)fucosyltransferase [Pithecia irrorata]	0.0	[1..365]	[1..366]
gi\|2217927 - gi\|2217927\|dbj\|BAA20559.1\| alpha(1,2)fucosyltransferase [Homo sapiens]	0.0	[1..365]	[1..365]
gi\|6491892 - gi\|6491892\|gb\|AAF14062.1\|AF045545_1 alpha(1,2)fucosyltransferase [Hylobates lar]	0.0	[1..365]	[1..365]
gi\|28566426 - gi\|28566426\|gb\|AAO43092.1\| alpha(1,2)fucosyltransferase [Cacajao melanocephalus]	0.0	[1..365]	[1..366]
FUT1_GORGO - Galactoside 2-alpha-L-fucosyltransferase 1 OS=Gorilla gorilla gorilla GN=FUT1 PE=3 SV=1 gi\|6491902 - gi\|6491902\|gb\|AAF14067.1\|AF080605_1 alpha (1,2) fucosyl transferase [Gorilla gorilla]	0.0	[1..365]	[1..366]

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Predicted Domain #1

Region A:
Residues: [1-77]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLRSHRQLC LAFLLVCVLS VIFFLHIHQD SFPHGLGLSI LCPDRRLVTP PVAIFCLPGT  60
   61 AMGPNASSSC PQHPASL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [78-365]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGTWTVYPNG RFGNQMGQYA TLLALAQLNG RRAFILPAMH AALAPVFRIT LPVLAPEVDS  60
   61 RTPWRELQLH DWMSEEYADL RDPFLKLSGF PCSWTFFHHL REQIRREFTL HDHLREEAQS 120
  121 VLGQLRLGRT GDRPRTFVGV HVRRGDYLQV MPQRWKGVVG DSAYLRQAMD WFRARHEAPV 180
  181 FVVTSNGMEW CKENIDTSQG DVTFAGDGQE ATPWKDFALL TQCNHTIMTI GTFGFWAAYL 240
  241 AGGDTVYLAN FTLPDSEFLK IFKPEAAFLP EWVGINADLS PLWTLAKP

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.91
Match:	2hhcA
Description:	No description for 2hhcA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits