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View Structure Prediction Details

Protein: KDELR2
Organism: Homo sapiens
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KDELR2.

Description E-value Query
Range
Subject
Range
gi|47214332 - gi|47214332|emb|CAG00841.1| unnamed protein product [Tetraodon nigroviridis]
0.0 [1..208] [1..208]
gi|76616893 - gi|76616893|ref|XP_586702.2| PREDICTED: similar to ER lumen protein retaining receptor 3 (KDEL recep...
2.0E-98 [1..211] [199..409]
gi|109482565 - gi|109482565|ref|XP_001076531.1| PREDICTED: similar to ER lumen protein retaining receptor 3 (KDEL r...
2.0E-95 [1..211] [340..552]
gi|27525270, gi|... - gi|74096067|ref|NP_001027671.1| KDEL receptor [Ciona intestinalis], gi|27525270|emb|CAC81951.1| KDEL...
1.0E-83 [1..212] [1..212]
ERD22_CHICK - ER lumen protein-retaining receptor 2 OS=Gallus gallus GN=KDELR2 PE=2 SV=1
3.0E-83 [1..212] [1..212]
ERD22_DANRE - ER lumen protein-retaining receptor 2 OS=Danio rerio GN=kdelr2 PE=2 SV=1
5.0E-83 [1..212] [1..212]
ERD21_XENTR - ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1
1.0E-82 [1..212] [1..212]
gi|73958020 - gi|73958020|ref|XP_850429.1| PREDICTED: similar to ER lumen protein retaining receptor 2 (KDEL recep...
ERD22_MOUSE - ER lumen protein-retaining receptor 2 OS=Mus musculus GN=Kdelr2 PE=1 SV=1
ERD22_BOVIN - ER lumen protein-retaining receptor 2 OS=Bos taurus GN=KDELR2 PE=2 SV=1
ERD22_RAT - ER lumen protein-retaining receptor 2 OS=Rattus norvegicus GN=Kdelr2 PE=2 SV=1
gi|53734577, gi|... - gb|AAH86053.1| Unknown (protein for MGC:98369) [Xenopus laevis], gb|AAH83938.1| Unknown (protein fo...
tr|G1SJ08|G1SJ08... - pep:novel scaffold:oryCun2:GL018931:94102:114335:1 gene:ENSOCUG00000003101 transcript:ENSOCUT0000000...
1.0E-82 [1..212] [1..212]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIFRLTGDL SHLAAIVILL LKIWKTRSCA GISGKSQLLF ALVFTTRYLD LFTSFISLYN  60
   61 TSMKVIYLAC SYATVYLIYL KFKATYDGNH DTFRVEFLVV PVGGLSFLVN HD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSPLEILWTF SIYLESVAIL PQLFMISKTG EAETITTHYL FFLGLYRALY LVNWIWRFYF  60
   61 EGFFDLIAVV AGVVQTILYC DFFYLYITKV LKGKKLSLPA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle