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View Structure Prediction Details

Protein: gi|26667203, gi|...
Organism: Homo sapiens
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|26667203, gi|....

Description E-value Query
Range
Subject
Range
gi|73953049 - gi|73953049|ref|XP_851537.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase II ga...
0.0 [1..556] [1..556]
CAMK2G - calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma
0.0 [1..556] [1..558]
gi|3241847, gi|1... - gi|3241847|dbj|BAA28869.1| calmodulin-dependent protein kinase II-gamma dash2 [Oryctolagus cuniculus...
0.0 [1..556] [1..518]
gi|76656633 - gi|76656633|ref|XP_885355.1| PREDICTED: similar to calcium/calmodulin-dependent protein kinase II ga...
0.0 [22..556] [30..564]
gi|71834408, gi|... - gi|71834408|ref|NP_001025296.1| calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1 ...
0.0 [1..556] [1..560]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTATCTRF TDDYQLFEEL GKGAFSVVRR CVKKTSTQEY AAKIINTKKL SARDHQKLER  60
   61 EARICRLLKH PNIVRLHDSI SEEGFHYLVF DLVTGGELFE DIVAREYYSE ADASHCIHQI 120
  121 LESVNHIHQH DIVHRDLKPE NLLLASKCKG AAVKLADFGL AIEVQGEQQA WFGFAGTPGY 180
  181 LSPEVLRKDP YGKPVDIWAC GVILYILLVG YPPFWDEDQH KLYQQIKAGA YDFPSPEWDT 240
  241 VTPEAKNLIN QMLTINPAKR ITADQALKHP WVCQRSTVAS MMHRQETVEC LRKFNARRKL 300
  301 KGAILTTMLV SRNFSAAKSL LNKKSDGGVK PQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 2v7oA
Description: No description for 2v7oA was found.

Predicted Domain #2
Region A:
Residues: [333-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNNKNSLVSP AQEPAPLQTA MEPQTTVVHN ATDGIKGSTE SCNTTTEDED LKAAPLRTGN  60
   61 GSSVPEGRSS RDRTAPSAGM Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [414-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQPSLCSSAM RKQEIIKITE QLIEAINNGD FEAYTKICDP GLTSFEPEAL GNLVEGMDFH  60
   61 KFYFENLLSK NSKPIHTTIL NPHVHVIGED AACIAYIRLT QYIDGQGRPR TSQSEETRVW 120
  121 HRRDGKWLNV HYHCSGAPAA PLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.39794
Match: 2ux0A
Description: No description for 2ux0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle