YRC Public Data Repository - Protein Structure Prediction

Protein:	N6AMT2
Organism:	Homo sapiens
Length:	214 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for N6AMT2.

Description	E-value	Query Range	Subject Range
gi\|55639523, gi\|... - gi\|55639523\|ref\|XP_509564.1\| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes], gi\|1146489...	2.0E-95	[1..214]	[1..214]
gi\|62661551, gi\|... - gi\|62661551\|ref\|XP_214202.3\| PREDICTED: similar to M142.8 [Rattus norvegicus], gi\|109502519\|ref\|XP_0...	5.0E-95	[1..212]	[11..222]
gi\|30705060, gi\|... - gi\|30705060\|gb\|AAH51925.1\| N-6 adenine-specific DNA methyltransferase 2 (putative) [Mus musculus], g...	1.0E-94	[1..212]	[11..222]
gi\|109120146 - gi\|109120146\|ref\|XP_001085919.1\| PREDICTED: similar to M142.8 [Macaca mulatta]	2.0E-94	[1..214]	[1..214]
gi\|57105038 - gi\|57105038\|ref\|XP_543173.1\| PREDICTED: similar to M142.8 [Canis familiaris]	7.0E-90	[1..211]	[1..211]
N6MT2_BOVIN - Protein-lysine N-methyltransferase N6AMT2 OS=Bos taurus GN=N6AMT2 PE=2 SV=1	5.0E-86	[1..214]	[1..215]
N6MT2_CHICK - Protein-lysine N-methyltransferase N6AMT2 OS=Gallus gallus GN=N6AMT2 PE=2 SV=1	5.0E-83	[9..211]	[8..213]
N6MT2_XENLA - Protein-lysine N-methyltransferase n6amt2 OS=Xenopus laevis GN=n6amt2 PE=2 SV=1	9.0E-81	[1..211]	[1..215]
gi\|27803053 - gi\|27803053\|emb\|CAD60756.1\| unnamed protein product [Podospora anserina]	3.0E-75	[1..208]	[1..227]

Back

Predicted Domain #1

Region A:
Residues: [1-214]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLEDDETP QLSAHALAAL QEFYAEQKQQ IEPGEDDKYN IGIIEENWQL SQFWYSQETA  60
   61 LQLAQEAIAA VGEGGRIACV SAPSVYQKLR ELCRENFSIY IFEYDKRFAM YGEEFIFYDY 120
  121 NNPLDLPERI AAHSFDIVIA DPPYLSEECL RKTSETVKYL TRGKILLCTG AIMEEQAAEL 180
  181 LGVKMCTFVP RHTRNLANEF RCYVNYDSGL DCGI

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits