YRC Public Data Repository - Protein Structure Prediction

Protein:	PDXK
Organism:	Homo sapiens
Length:	312 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDXK.

Description	E-value	Query Range	Subject Range
PDXK_SHEEP - Pyridoxal kinase OS=Ovis aries GN=PDXK PE=1 SV=1	1.0E-62	[1..312]	[1..312]
PDXK_BOVIN - Pyridoxal kinase OS=Bos taurus GN=PDXK PE=2 SV=1	6.0E-62	[1..312]	[1..312]
gi\|62665802, gi\|... - gi\|62665802\|ref\|XP_342113.2\| PREDICTED: similar to pyridoxal (pyridoxine, vitamin B6) kinase [Rattus...	9.0E-62	[1..312]	[1..312]
gi\|110591348, gi... - gi\|110591348\|pdb\|2F7K\|B Chain B, Crystal Structure Of Human Pyridoxal Kinase, gi\|110591347\|pdb\|2F7K\|...	5.0E-61	[1..312]	[16..327]
PDXK_MOUSE - Pyridoxal kinase OS=Mus musculus GN=Pdxk PE=1 SV=1	6.0E-61	[1..312]	[1..312]
gi\|114684569 - gi\|114684569\|ref\|XP_001145080.1\| PREDICTED: similar to Chain A, Crystal Structure Of Human Pyridoxal...	9.0E-61	[1..312]	[1..312]
gi\|33303899 - gi\|33303899\|gb\|AAQ02463.1\| pyridoxal kinase [synthetic construct]	9.0E-61	[1..312]	[1..312]

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Predicted Domain #1

Region A:
Residues: [1-312]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEECRVLSI QSHVIRGYVG NRAATFPLQV LGFEIDAVNS VQFSNHTGYA HWKGQVLNSD  60
   61 ELQELYEGLR LNNMNKYDYV LTGYTRDKSF LAMVVDIVQE LKQQNPRLVY VCDPVLGDKW 120
  121 DGEGSMYVPE DLLPVYKEKV VPLADIITPN QFEAELLSGR KIHSQEEALR VMDMLHSMGP 180
  181 DTVVITSSDL PSPQGSNYLI VLGSQRRRNP AGSVVMERIR MDIRKVDAVF VGTGDLFAAM 240
  241 LLAWTHKHPN NLKVACEKTV STLHHVLQRT IQCAKAQAGE GVRPSPMQLE LRMVQSKRDI 300
  301 EDPEIVVQAT VL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.522879
Match:	2f7kA
Description:	No description for 2f7kA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits