YRC Public Data Repository - Protein Structure Prediction

Protein:	YWHAB
Organism:	Homo sapiens
Length:	246 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YWHAB.

Description	E-value	Query Range	Subject Range
gi\|68436321 - gi\|68436321\|ref\|XP_699659.1\| PREDICTED: similar to tyrosine 3-monooxygenase/tryptophan 5-monooxygena...	0.0	[3..246]	[1532..1775]
gi\|109087133 - gi\|109087133\|ref\|XP_001098275.1\| PREDICTED: similar to tyrosine 3/tryptophan 5 -monooxygenase activa...	0.0	[3..244]	[334..575]
gi\|114621209 - gi\|114621209\|ref\|XP_528202.2\| PREDICTED: similar to YWHAZ protein [Pan troglodytes]	0.0	[3..244]	[138..379]
gi\|30354619 - gi\|30354619\|gb\|AAH51814.1\| YWHAZ protein [Homo sapiens]	0.0	[3..244]	[76..317]
gi\|17017334 - gi\|17017334\|gb\|AAL33624.1\|AF440230_1 protein kinase A activity reporter 1 fusion protein [synthetic ...	0.0	[1..236]	[230..465]
gi\|76630316 - gi\|76630316\|ref\|XP_874865.1\| PREDICTED: similar to 14-3-3 protein theta (14-3-3 protein tau) (14-3-3...	0.0	[3..228]	[165..390]

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Predicted Domain #1

Region A:
Residues: [1-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMDKSELVQ KAKLAEQAER YDDMAAAMKA VTEQGHELSN EERNLLSVAY KNVVGARRSS  60
   61 WRVISSIEQK TERNEKKQQM GKEYREKIEA ELQDICNDVL ELLDKYLIPN ATQPESKVFY 120
  121 LKMKGDYFRY LSEVASGDNK QTTVSNSQQA YQEAFEISKK EMQPTHPIRL GLALNFSVFY 180
  181 YEILNSPEKA CSLAKTAFDE AIAELDTLNE ESYKDSTLIM QLLRDNLTLW TSENQGDEGD 240
  241 AGEGEN

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Detection Method:	PSI-BLAST
Confidence:	112.0
Match:	2bq0A
Description:	14-3-3 Protein Beta (Human)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits