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View Structure Prediction Details

Protein: PI4K2B
Organism: Homo sapiens
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PI4K2B.

Description E-value Query
Range
Subject
Range
P4K2B_MOUSE - Phosphatidylinositol 4-kinase type 2-beta OS=Mus musculus GN=Pi4k2b PE=1 SV=1
706.0 [0..1] [481..1]
gi|33304065 - gi|33304065|gb|AAQ02540.1| phosphatidylinositol 4-kinase type-II beta [synthetic construct]
687.0 [0..1] [481..1]
gi|30354037, gi|... - gi|8922869|ref|NP_060793.1| phosphatidylinositol 4-kinase type 2 beta [Homo sapiens], gi|7023561|dbj...
687.0 [0..1] [481..1]
P4K2B_RAT - Phosphatidylinositol 4-kinase type 2-beta OS=Rattus norvegicus GN=Pi4k2b PE=2 SV=1
675.0 [0..1] [481..9]
P4K2B_XENTR - Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus tropicalis GN=pi4k2b PE=2 SV=1
591.0 [0..6] [481..2]
gi|76654637, gi|... - gi|76654637|ref|XP_584546.2| PREDICTED: similar to Phosphatidylinositol 4-kinase type II isoform 1 [...
591.0 [0..17] [481..9]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDPSEPDRL ASADGGSPEE EEDGEREPLL PRIAWAHPRR GAPGSAVRLL DAAGEEGEAG  60
   61 DEELPLPPGD VGVSRSSSAE LDRSRPAVSV TIGTSEMNAF LDDPEFADIM LRAEQAIEVG 120
  121 IFPERISQGS SGSYFVKDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.459 N/A N/A a.118.8 TPR-like
View Download 0.354 N/A N/A a.290.1 Description not found.
View Download 0.294 N/A N/A a.74.1 Cyclin-like
View Download 0.241 N/A N/A a.290.1 Description not found.
View Download 0.235 N/A N/A a.226.1 Description not found.
View Download 0.233 N/A N/A a.25.1 Ferritin-like

Predicted Domain #2
Region A:
Residues: [140-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRKIIGVFKP KSEEPYGQLN PKWTKYVHKV CCPCCFGRGC LIPNQGYLSE AGAYLVDNKL  60
   61 HLSIVPKTKV VWLVSETFNY NAIDRAKSRG KKYALEKVPK VGRKFHRIGL PPKIGSFQLF 120
  121 VEGYKEAEYW LRKFEAD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLPENIRKQF QSQFERLVIL DYIIRNTDRG NDNWLVRYEK QKCEKEIDHK ESKWIDDEEF  60
   61 LIKIAAIDNG LAFPFKHPDE WRAYPFHWAW LPQAKVPFSE EIRNLILPYI SDMNFVQDLC 120
  121 EDLYELFKTD KGFDKATFES QMSVMRGQIL NLTQALRDGK SPFQLVQIPC VIVERSQGGS 180
  181 QGRIVHLSNS FTQTVNCRKP FFSSW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle