YRC Public Data Repository - Protein Structure Prediction

Protein:	S100A3
Organism:	Homo sapiens
Length:	101 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for S100A3.

Description	E-value	Query Range	Subject Range
gi\|109016674 - gi\|109016674\|ref\|XP_001108718.1\| PREDICTED: similar to Protein S100-A11 (S100 calcium-binding protei...	5.0E-36	[2..98]	[440..536]
gi\|76612513 - gi\|76612513\|ref\|XP_595126.2\| PREDICTED: similar to Calgizzarin (S100 calcium-binding protein A11) (S...	3.0E-34	[2..98]	[86..182]
gi\|34811430, gi\|... - gi\|34811430\|pdb\|1NSH\|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models), gi\|34811429\|pd...	2.0E-32	[2..98]	[3..99]
gi\|60829601, gi\|... - gi\|61371878\|gb\|AAX43748.1\| S100 calcium binding protein A11 [synthetic construct], gi\|61369077\|gb\|AA...	5.0E-32	[2..98]	[7..103]
gi\|61358877, gi\|... - gi\|61358882\|gb\|AAX41635.1\| S100 calcium binding protein A11 [synthetic construct], gi\|61358877\|gb\|AA... S100A11 - S100 calcium binding protein A11 HGNC:10488\|MIM:6... - calcium binding protein A11 gi\|55593153 - gi\|55593153\|ref\|XP_514427.1\| PREDICTED: S100 calcium binding protein A11 (calgizzarin) [Pan troglody...	5.0E-32	[2..98]	[7..103]
S10AB_CHICK - Protein S100-A11 OS=Gallus gallus GN=S100A11 PE=1 SV=2	2.0E-31	[2..97]	[6..101]
S10AB_RAT - Protein S100-A11 OS=Rattus norvegicus GN=S100a11 PE=3 SV=1	2.0E-31	[1..90]	[1..90]

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Predicted Domain #1

Region A:
Residues: [1-101]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPLEQAVA AIVCTFQEYA GRCGDKYKLC QAELKELLQK ELATWTPTEF RECDYNKFMS  60
   61 VLDTNKDCEV DFVEYVRSLA CLCLYCHEYF KDCPSEPPCS Q

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.221849
Match:	1ksoA
Description:	Calcyclin (S100)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	3.02768444846642	bayes_pls_golite062009
protein binding	1.18539140568889	bayes_pls_golite062009
calcium ion binding	1.03474411638676	bayes_pls_golite062009
cation binding	0.842727464826814	bayes_pls_golite062009
metal ion binding	0.842727464826814	bayes_pls_golite062009
ion binding	0.839657057521392	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: