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View Structure Prediction Details

Protein: RG9MTD2
Organism: Homo sapiens
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RG9MTD2.

Description E-value Query
Range
Subject
Range
gi|114595335, gi... - gi|114595339|ref|XP_001167367.1| PREDICTED: RNA (guanine-9-) methyltransferase domain containing 2 i...
402.0 [0..1] [339..1]
gi|109075100, gi... - gi|109075100|ref|XP_001107528.1| PREDICTED: similar to RNA (guanine-9-) methyltransferase domain con...
376.0 [0..1] [339..1]
TM10A_RAT - tRNA methyltransferase 10 homolog A OS=Rattus norvegicus GN=Trmt10a PE=1 SV=1
372.0 [0..1] [322..1]
gi|30425096, gi|... - ref|NP_780598.1| RNA (guanine-9-) methyltransferase domain containing 2 [Mus musculus], gi|26354787...
371.0 [0..1] [328..3]
gi|74002269 - gi|74002269|ref|XP_544994.2| PREDICTED: similar to RNA (guanine-9-) methyltransferase domain contain...
367.0 [0..1] [339..1]
TM10A_BOVIN - tRNA methyltransferase 10 homolog A OS=Bos taurus GN=TRMT10A PE=2 SV=1
359.0 [0..1] [339..1]
gi|4454968 - gi|4454968|gb|AAD21019.1| unknown [Homo sapiens]
324.0 [0..107] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEMLPAFI ETSNVDKKQG INEDQEESQK PRLGEGCEPI SKRQMKKLIK QKQWEEQREL  60
   61 RKQKRKEKRK RKKLERQCQM EPNSDGHDRK RVRRDVVH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.523 N/A N/A a.29.12 Description not found.
View Download 0.507 N/A N/A a.7.8 GAT domain
View Download 0.495 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.495 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.466 N/A N/A a.29.8 Description not found.
View Download 0.439 N/A N/A a.90.1 Transcription factor STAT-4 N-domain
View Download 0.400 N/A N/A a.7.8 GAT domain
View Download 0.323 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases

Predicted Domain #2
Region A:
Residues: [99-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STLRLIIDCS FDHLMVLKDI KKLHKQIQRC YAENRRALHP VQFYLTSHGG QLKKNMDEND  60
   61 KGWVNWKDIH IKPEHYSELI KKEDLIYLTS DSPNILKELD ESKAYVIGGL VDHNHHKGLT 120
  121 YKQASDYGIN HAQLPLGNFV KMNSRKVLAV NHVFEIILEY LETRDWQEAF FTILPQRKGA 180
  181 VPTDKACESA SHDNQSVRME EGGSDSDSSE EEYSRNELDS PHEEKQDKEN HTESTVNSLP 240
  241 H

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 76.920819
Match: PF01746.12
Description: No description for PF01746.12 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle