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View Structure Prediction Details

Protein: RPL36
Organism: Homo sapiens
Length: 105 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL36.

Description E-value Query
Range
Subject
Range
gi|94368091, gi|... - gi|94368091|ref|XP_985262.1| PREDICTED: similar to ribosomal protein L36 [Mus musculus], gi|82884369...
176.0 [0..1] [105..38]
gi|109081357 - gi|109081357|ref|XP_001100689.1| PREDICTED: similar to ribosomal protein L36 [Macaca mulatta]
163.0 [0..1] [105..1]
gi|55622646 - gi|55622646|ref|XP_526581.1| PREDICTED: similar to 60S ribosomal protein L36 [Pan troglodytes]
162.0 [0..1] [105..1]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRYPMAVG LNKGHKVTKN VSKPRHSRRR GRLTKHTKFV RDMIREVCGF APYERRAMEL  60
   61 LKVSKDKRAL KFIKKRVGTH IRAKRKREEL SNVLAAMRKA AAKKD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.387216
Match: PF01158.9
Description: No description for PF01158.9 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.599 N/A N/A d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.597 N/A N/A d.87.2 CO dehydrogenase flavoprotein C-terminal domain-like
View Download 0.565 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.526 N/A N/A a.188.1 Description not found.
View Download 0.483 N/A N/A c.126.1 Description not found.
View Download 0.462 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.390 N/A N/A a.28.1 ACP-like
View Download 0.389 N/A N/A a.28.1 ACP-like
View Download 0.382 N/A N/A d.224.1 SufE-like
View Download 0.368 N/A N/A a.118.11 Cytochrome c oxidase subunit E
View Download 0.319 N/A N/A d.224.1 SufE-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle