| Protein: | TMPO |
| Organism: | Homo sapiens |
| Length: | 694 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMPO.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..694] | [1..694] |
|
|
0.0 | [1..694] | [1..694] |
|
|
0.0 | [1..694] | [1..695] |
|
|
0.0 | [1..694] | [1..693] |
|
|
0.0 | [1..693] | [1..692] |
|
|
0.0 | [1..694] | [1..689] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MPEFLEDPSV LTKDKLKSEL VANNVTLPAG EQRKDVYVQL YLQHLTARNR PPLPAGTNSK 60
61 GPPDFSSDEE REPTPVLGSG AAAAGRSRAA VGRKATKKTD KPRQEDKDDL DVTELTNEDL 120
121 LDQLVKYGVN PGPIVGTTRK LYEKKLLKLR EQGTESRSST PLPTISSSAE NTRQNGSNDS 180
181 DRYS
|
| Detection Method: |  |
| Confidence: | 65.154902 |
| Match: | 1gjjA |
| Description: | Thymopoietin, LAP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.63363793174066 | bayes_pls_golite062009 |
| lamin binding | 1.3991011791738 | bayes_pls_golite062009 |
| protein binding | 1.22727766276611 | bayes_pls_golite062009 |
|
Region A: Residues: [185-233] |
1 11 21 31 41 51
| | | | | |
1 DNEEGKKKEH KKVKSTRDIV PFSELGTTPS GGGFFQGISF PEISTRPPL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [234-441] |
1 11 21 31 41 51
| | | | | |
1 GSTELQAAKK VHTSKGDLPR EPLVATNLPG RGQLQKLASE RNLFISCKSS HDRCLEKSSS 60
61 SSSQPEHSAM LVSTAASPSL IKETTTGYYK DIVENICGRE KSGIQPLCPE RSHISDQSPL 120
121 SSKRKALEES ESSQLISPPL AQAIRDYVNS LLVQGGVGSL PGTSNSMPPL DVENIQKRID 180
181 QSKFQETEFL SPPRKVPRLS EKSVEERD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [442-694] |
1 11 21 31 41 51
| | | | | |
1 SGSFVAFQNI PGSELMSSFA KTVVSHSLTT LGLEVAKQSQ HDKIDASELS FPFHESILKV 60
61 IEEEWQQVDR QLPSLACKYP VSSREATQIL SVPKVDDEIL GFISEATPLG GIQAASTESC 120
121 NQQLDLALCR AYEAAASALQ IATHTAFVAK AMQADISQAA QILSSDPSRT HQALGILSKT 180
181 YDAASYICEA AFDEVKMAAH TMGNATVGRR YLWLKDCKIN LASKNKLAST PFKGGTLFGG 240
241 EVCKVIKKRG NKH
|
| Detection Method: | |
| Confidence: | 115.0 |
| Match: | 2v0xA |
| Description: | No description for 2v0xA was found. |
