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View Structure Prediction Details

Protein: MAP7
Organism: Homo sapiens
Length: 749 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAP7.

Description E-value Query
Range
Subject
Range
MYH4_PIG - Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
2.0E-83 [1..744] [1202..1937]
MYH4_RABIT - Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 PE=1 SV=1
3.0E-83 [1..744] [1203..1938]
MYH4_CANLF - Myosin-4 OS=Canis lupus familiaris GN=MYH4 PE=3 SV=1
6.0E-83 [1..744] [1204..1939]
gi|205830436, gi... - gi|205830436|ref|NP_001128629.1| myosin, heavy polypeptide 2, skeletal muscle, adult [Rattus norvegi...
6.0E-83 [1..744] [1207..1942]
gi|109113271 - gi|109113271|ref|XP_001113877.1| PREDICTED: myosin, heavy polypeptide 2, skeletal muscle, adult [Mac...
8.0E-83 [1..744] [1204..1939]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELGAGGDG HRGGDGAVRS ETAPDSYKVQ DKKNASSRPA SAISGQNNNH SGNKPDPPPV  60
   61 LRVDDRQRLA RERREEREKQ LAAREIVWLE REERARQHYE KHLEERKKRL EEQRQKEERR 120
  121 RAAVEEKRRQ RLEEDKERHE AVVRRTMERS QKPKQKHNRW SWGGSLHGSP SIHSADPDRR 180
  181 SVSTMNLSKY VDPVISKRLS SSSATLLNSP DRARRLQLSP WESSVVNRLL TPTHSFLARS 240
  241 KSTAALSGEA ASCSPIIMPY KAAHSRNSMD RPKLFVTPPE GSSRRRIIHG TASYKKERER 300
  301 ENVLFLTSGT R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [312-647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RAVSPSNPKA RQPARSRLWL PSKSLPHLPG TPRPTSSLPP GSVKAAPAQV RPPSPGNIRP  60
   61 VKREVKVEPE KKDPEKEPQK VANEPSLKGR APLVKVEEAT VEERTPAEPE VGPAAPAMAP 120
  121 APASAPAPAS APAPAPVPTP AMVSAPSSTV NASASVKTSA GTTDPEEATR LLAEKRRLAR 180
  181 EQREKEERER REQEELERQK REELAQRVAE ERTTRREEES RRLEAEQARE KEEQLQRQAE 240
  241 ERALREREEA ERAQRQKEEE ARVREEAERV RQEREKHFQR EEQERLERKK RLEEIMKRTR 300
  301 RTEATDKKTS DQRNGDIAKG ALTGGTEVSA LPCTTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [648-749]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APGNGKPVGS PHVVTSHQSK VTVESTPDLE KQPNENGVSV QNENFEEIIN LPIGSKPSRL  60
   61 DVTNSESPEI PLNPILAFDD EGTLGPLPQV DGVQTQQTAE VI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle