| Protein: | RANBP9 |
| Organism: | Homo sapiens |
| Length: | 729 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RANBP9.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [149..729] | [133..712] |
|
|
0.0 | [111..729] | [36..653] |
|
|
0.0 | [99..729] | [412..1042] |
|
|
0.0 | [126..729] | [199..802] |
|
|
0.0 | [162..729] | [17..548] |
|
|
0.0 | [162..729] | [17..548] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MSGQPPPPPP QQQQQQQQLS PPPPAALAPV SGVVLPAPPA VSAGSSPAGS PGGGAGGEGL 60
61 GAAAAALLLH PPPPPPPATA APPPPPPPPP PPASAAAPAS GPPAPPGLAA GPGPAGGAPT 120
121 PALVAGSSAA APFPHG
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [137-363] |
1 11 21 31 41 51
| | | | | |
1 DSALNEQEKE LQRRLKRLYP AVDEQETPLP RSWSPKDKFS YIGLSQNNLR VHYKGHGKTP 60
61 KDAASVRATH PIPAACGIYY FEVKIVSKGR DGYMGIGLSA QGVNMNRLPG WDKHSYGYHG 120
121 DDGHSFCSSG TGQPYGPTFT TGDVIGCCVN LINNTCFYTK NGHSLGIAFT DLPPNLYPTV 180
181 GLQTPGEVVD ANFGQHPFVF DIEDYMREWR TKIQAQIDRF PIGDREG
|
| Detection Method: | |
| Confidence: | 26.09691 |
| Match: | 2fnjA |
| Description: | No description for 2fnjA was found. |
| Term | Confidence | Notes |
| binding | 2.25309005274324 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.16616430987996 | bayes_pls_golite062009 |
| actin binding | 1.52354782116386 | bayes_pls_golite062009 |
| protein binding | 0.964880666937228 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.160855218996334 | bayes_pls_golite062009 |
|
Region A: Residues: [364-571] |
1 11 21 31 41 51
| | | | | |
1 EWQTMIQKMV SSYLVHHGYC ATAEAFARST DQTVLEELAS IKNRQRIQKL VLAGRMGEAI 60
61 ETTQQLYPSL LERNPNLLFT LKVRQFIEMV NGTDSEVRCL GGRSPKSQDS YPVSPRPFSS 120
121 PSMSPSHGMN IHNLASGKGS TAHFSGFESC SNGVISNKAH QSYCHSNKHQ SSNLNVPELN 180
181 SINMSRSQQV NNFTSNDVDM ETDHYSNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [572-729] |
1 11 21 31 41 51
| | | | | |
1 VGETSSNGFL NGSSKHDHEM EDCDTEMEVD SSQLRRQLCG GSQAAIERMI HFGRELQAMS 60
61 EQLRRDCGKN TANKKMLKDA FSLLAYSDPW NSPVGNQLDP IQREPVCSAL NSAILETHNL 120
121 PKQPPLALAM GQATQCLGLM ARSGIGSCAF ATVEDYLH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
