YRC Public Data Repository - Protein Structure Prediction

Protein:	TTLL12
Organism:	Homo sapiens
Length:	644 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TTLL12.

Description	E-value	Query Range	Subject Range
gi\|114686798 - gi\|114686798\|ref\|XP_001171890.1\| PREDICTED: tubulin tyrosine ligase-like family, member 12 isoform 1...	0.0	[1..644]	[1..644]
gi\|1469888 - gi\|1469888\|dbj\|BAA09774.1\| KIAA0153 [Homo sapiens]	0.0	[7..644]	[1..638]
TTL12_MOUSE - Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus GN=Ttll12 PE=1 SV=1	0.0	[1..644]	[1..639]
gi\|209571551, gi... - gi\|209571551\|ref\|NP_001129394.1\| tubulin tyrosine ligase-like family, member 12 [Rattus norvegicus],...	0.0	[1..644]	[1..639]
gi\|109094480 - gi\|109094480\|ref\|XP_001104848.1\| PREDICTED: similar to CG1550-PA [Macaca mulatta]	0.0	[8..644]	[115..751]
gi\|73969353 - gi\|73969353\|ref\|XP_531703.2\| PREDICTED: similar to CG1550-PA [Canis familiaris]	0.0	[12..644]	[5..642]
gi\|115304731, gi... - gi\|76617127\|ref\|XP_887404.1\| PREDICTED: similar to CG1550-PA isoform 2 [Bos taurus], gi\|76617125\|ref...	0.0	[7..644]	[16..655]
gi\|41053788, gi\|... - gi\|41053788\|ref\|NP_956546.1\| tubulin tyrosine ligase-like family, member 12 [Danio rerio], gi\|291268...	0.0	[28..644]	[14..625]

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Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAERGPERR PAERSSPGQT PEEGAQALAE FAALHGPALR ASGVPERYWG RLLHKLEHEV  60
   61 FDAGEVFGIM QVEEVEEEED EAAREVRKQQ PNPGNELCYK VIVTRESGLQ AAHPNSIFLI 120
  121 DHAWTCRVEH ARQQLQQVPG LLHRMANLMG IEFHGELPST EAVALVLEEM WKFNQTYQLA 180
  181 HGTAEEKMPV WYIMDEFGSR IQHA

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [205-360]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVPSFATAPF FYMPQQVAYT LLWPLRDLDT GEEVTRDFAY GETDPLIRKC MLLPWAPTDM  60
   61 LDLSSCTPEP PAEHYQAILE ENKEKLPLDI NPVVHPHGHI FKVYTDVQQV ASSLTHPRFT 120
  121 LTQSEADADI LFNFSHFKDY RKLSQERPGV LLNQFP

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [361-644]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CENLLTVKDC LASIARRAGG PEGPPWLPRT FNLRTELPQF VSYFQQRERW GEDNHWICKP  60
   61 WNLARSLDTH VTKSLHSIIR HRESTPKVVS KYIESPVLFL REDVGKVKFD IRYIVLLRSV 120
  121 RPLRLFVYDV FWLRFSNRAF ALNDLDDYEK HFTVMNYDPD VVLKQVHCEE FIPEFEKQYP 180
  181 EFPWTDVQAE IFRAFTELFQ VACAKPPPLG LCDYPSSRAM YAVDLMLKWD NGPDGRRVMQ 240
  241 PQILEVNFNP DCERACRYHP TFFNDVFSTL FLDQPGGCHV TCLV

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.984
Match:	2qb5A
Description:	No description for 2qb5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits