YRC Public Data Repository - Protein Structure Prediction

Protein:	GPX5
Organism:	Homo sapiens
Length:	221 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPX5.

Description	E-value	Query Range	Subject Range
gi\|109070150, gi... - gi\|226531183\|ref\|NP_001152774.1\| glutathione peroxidase 5 precursor [Macaca mulatta], gi\|109070150\|r... GPX5_MACFA - Epididymal secretory glutathione peroxidase OS=Macaca fascicularis GN=GPX5 PE=2 SV=1	2.0E-59	[1..221]	[1..221]
gi\|1589389 - gi\|1589389\|prf\|\|2211241A glutathione peroxidase-like protein	2.0E-57	[1..220]	[1..220]
gi\|109505943 - gi\|109505943\|ref\|XP_001059839.1\| PREDICTED: similar to Epididymal secretory glutathione peroxidase p...	5.0E-57	[1..220]	[17..236]

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Predicted Domain #1

Region A:
Residues: [1-221]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTQLRVVHL LPLLLACFVQ TSPKQEKMKM DCHKDEKGTI YDYEAIALNK NEYVSFKQYV  60
   61 GKHILFVNVA TYCGLTAQYP ELNALQEELK PYGLVVLGFP CNQFGKQEPG DNKEILPGLK 120
  121 YVRPGGGFVP SFQLFEKGDV NGEKEQKVFS FLKHSCPHPS EILGTFKSIS WDPVKVHDIR 180
  181 WNFEKFLVGP DGIPVMRWSH RATVSSVKTD ILAYLKQFKT K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.69897
Match:	2i3yA
Description:	No description for 2i3yA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits