| Protein: | KCND1 |
| Organism: | Homo sapiens |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCND1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..647] | [1..647] |
|
|
0.0 | [1..647] | [1..647] |
|
|
0.0 | [1..647] | [1..647] |
|
|
0.0 | [1..647] | [1..651] |
|
|
0.0 | [1..647] | [1..650] |
|
|
0.0 | [1..647] | [1..648] |
|
Region A: Residues: [1-511] |
1 11 21 31 41 51
| | | | | |
1 MAAGLATWLP FARAAAVGWL PLAQQPLPPA PGVKASRGDE VLVVNVSGRR FETWKNTLDR 60
61 YPDTLLGSSE KEFFYDADSG EYFFDRDPDM FRHVLNFYRT GRLHCPRQEC IQAFDEELAF 120
121 YGLVPELVGD CCLEEYRDRK KENAERLAED EEAEQAGDGP ALPAGSSLRQ RLWRAFENPH 180
181 TSTAALVFYY VTGFFIAVSV IANVVETIPC RGSARRSSRE QPCGERFPQA FFCMDTACVL 240
241 IFTGEYLLRL FAAPSRCRFL RSVMSLIDVV AILPYYIGLL VPKNDDVSGA FVTLRVFRVF 300
301 RIFKFSRHSQ GLRILGYTLK SCASELGFLL FSLTMAIIIF ATVMFYAEKG TNKTNFTSIP 360
361 AAFWYTIVTM TTLGYGDMVP STIAGKIFGS ICSLSGVLVI ALPVPVIVSN FSRIYHQNQR 420
421 ADKRRAQQKV RLARIRLAKS GTTNAFLQYK QNGGLEDSGS GEEQALCVRN RSAFEQQHHH 480
481 LLHCLEKTTC HEFTDELTFS EALGAVSPGG R
|
| Detection Method: |  |
| Confidence: | 84.154902 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [512-647] |
1 11 21 31 41 51
| | | | | |
1 TSRSTSVSSQ PVGPGSLLSS CCPRRAKRRA IRLANSTASV SRGSMQELDM LAGLRRSHAP 60
61 QSRSSLNAKP HDSLDLNCDS RDFVAAIISI PTPPANTPDE SQPSSPGGGG RAGSTLRNSS 120
121 LGTPCLFPET VKISSL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
