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View Structure Prediction Details

Protein: NDUFS3
Organism: Homo sapiens
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUFS3.

Description E-value Query
Range
Subject
Range
gi|109106401 - gi|109106401|ref|XP_001105264.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein ...
0.0 [1..264] [1..264]
gi|62898071 - gi|62898071|dbj|BAD96975.1| NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q r...
0.0 [1..264] [1..264]
NDUS3_GORGO - NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Gorilla gorilla gorilla GN=N...
gi|111661910 - gi|111661910|gb|ABH12176.1| mitochondrial complex I subunit NDUFS3 [Gorilla gorilla]
0.0 [3..264] [2..263]
NDUS3_PONAB - NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Pongo abelii GN=NDUFS3 PE=2 ...
NDUS3_PONPY - NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Pongo pygmaeus GN=NDUFS3 PE=...
0.0 [3..264] [2..263]
NDUS3_MOUSE - NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus GN=Ndufs3 PE=1 ...
0.0 [3..264] [2..263]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAVARLW WRGILGASAL TRGTGRPSVL LLPVRRESAG ADTRPTVRPR NDVAHKQLSA  60
   61 FGEYVAEILP KYVQQVQVSC FNELEVCIHP DGVIPVLTFL RDHTNAQFKS LVDLTAVDVP 120
  121 TRQNRFEIVY NLLSLRFNSR IRVKTYTDEL TPIESAVSVF KAANWYEREI WDMFGVFFAN 180
  181 HPDLRRILTD YGFEGHPFRK DFPLSGYVEL RYDDEVKRVV AEPVELAQEF RKFDLNSPWE 240
  241 AFPVYRQPPE SLKLEAGDKK PDAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.09691
Match: 2fug5
Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle