YRC Public Data Repository - Protein Structure Prediction

Protein:	AML1
Organism:	Saccharomyces cerevisiae
Length:	193 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AML1.

Description	E-value	Query Range	Subject Range
EFM5_YEAST - Protein-lysine N-methyltransferase EFM5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=... AML1 - Putative protein of unknown function with similarity to methyltransferase family members; green fluo...	4.0E-80	[1..193]	[1..193]
gi\|13940380 - gi\|13940380\|emb\|CAC38017.1\| hypothetical protein [Zygosaccharomyces rouxii]	9.0E-80	[1..193]	[52..244]
gi\|30705060, gi\|... - gi\|30705060\|gb\|AAH51925.1\| N-6 adenine-specific DNA methyltransferase 2 (putative) [Mus musculus], g...	2.0E-66	[1..185]	[51..217]
gi\|18410963, gi\|... - gi\|22137250\|gb\|AAM91470.1\| AT3g58470/F14P22_60 [Arabidopsis thaliana], gi\|18410963\|ref\|NP_567065.1\| ...	2.0E-64	[1..185]	[67..236]
gi\|16768410 - gi\|16768410\|gb\|AAL28424.1\| GM04011p [Drosophila melanogaster]	6.0E-55	[4..189]	[43..219]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	4.0E-40	[1..109]	[67..171]
gi\|50918727, gi\|... - gi\|50918727\|ref\|XP_469760.1\| unknown protein [Oryza sativa], gi\|18087666\|gb\|AAL58958.1\|AC091811_7 un...	9.0E-38	[1..127]	[53..178]

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Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFKEDWQL SQFWYSDDTA AILADAILEG ADENTVIAIV SAPSVYAAIQ KKPTNEIPTE  60
   61 HIYLFEFDKR FELLAGRDHF FFYDYNKPLD FSDEIKGKVD RLLIDPPFLN EDCQTKSSIT 120
  121 AKCLLAPNDN SKTKKGVFKH RLISCTGERM SEVISKVYSD TRITTFLPEH SNGLSNEFRC 180
  181 YANFECSSWK FAS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.269206971242079	bayes_pls_golite062009
transferase activity	0.194033027086708	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: