| Protein: | PCH2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 536 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PCH2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..536] | [278..778] |
|
|
0.0 | [3..524] | [293..774] |
|
|
0.0 | [3..519] | [293..769] |
|
|
0.0 | [3..524] | [290..771] |
|
|
0.0 | [3..519] | [290..765] |
|
|
0.0 | [6..536] | [468..969] |
|
|
0.0 | [6..536] | [468..969] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MSYIVDLQVR GSSLRVIKCM FREDEQISSL HSGSDSKQNS NKKLGEFLNL LKAVVKRKLE 60
61 SFPKDRLKTS IITGQELMRE GQGSIEIKDP PTEAQQHLIR SLAKVLLHQF SSINGKVNTV 120
121 NEGQDNLFLS LFVKKISIEQ QSTSHVSIKL NFHEKINLGQ HIDSILDSEE TNESDTYHMG 180
181 SVDEFIIYPF CCLEEQDELK NGSILSTEFD KIDLELDEDD G
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [222-467] |
1 11 21 31 41 51
| | | | | |
1 FEGETLNNCI NSVGNFDIPL SKQTLNLVNI SYLPGTTFEG QWESLYFGNN IKERLYSYAT 60
61 ISLKIARFKQ TGDSNQEDIT TLITNNKLLL VHGPPGTGKT TLCKALCQKL SVRREFSDGS 120
121 DTIDTNYKGI IIELSCARIF SKWFGESSKN ISIVFKDIEE LLKVNEGRGI FICLLIDEVE 180
181 AIASSRTNLS SRNESTDGIR VVNTLLTQLD RLKKYHNFLA LATSNLLDSL DDAFVDRADG 240
241 VFYVGN
|
| Detection Method: | |
| Confidence: | 177.69897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-536] |
1 11 21 31 41 51
| | | | | |
1 PTAEGILHIL KVCIEEMITS GIILFHARST GVKFFNKYQD ILRKIAIKCS VCFFLLFYFY 60
61 DSFSFFPSS
|
| Detection Method: | |
| Confidence: | 177.69897 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
