YRC Public Data Repository - Protein Structure Prediction

Protein:	OST2
Organism:	Saccharomyces cerevisiae
Length:	130 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OST2.

Description	E-value	Query Range	Subject Range
OST2_YEAST - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 OS=Saccharomyces cerevis... OST2 - Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine...	7.0E-33	[1..130]	[1..130]
gi\|25313138 - gi\|25313138\|pir\|\|F84769 defender against cell death protein [imported] - Arabidopsis thaliana	4.0E-32	[17..129]	[48..159]
DAD1_PEA - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Pisum sativum GN=DAD1...	1.0E-31	[17..129]	[5..116]
DAD1_CITUN - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Citrus unshiu GN=DAD1...	1.0E-31	[18..129]	[4..114]
gi\|29423681 - gi\|29423681\|gb\|AAO73434.1\| DAD1 [Petunia x hybrida]	3.0E-31	[16..129]	[3..115]
PGSC0003DMP400026038 - PGSC0003DMT400038343 DAD1_SOLLC - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Solanum lycopersicum ...	9.0E-31	[16..129]	[3..115]
gi\|13548685 - gi\|13548685\|dbj\|BAB40808.1\| homolog of defender against apoptotic death 1 homolog [Nicotiana suaveol...	1.0E-30	[16..129]	[3..115]

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Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAPKANTP KVTSTSSAVL TDFQETFKTS KRAYFAQIEK YPKLKLIDTF CFFLVLLGVI  60
   61 QCTFIILIRD NFPFNAFLAG FIICVGQFVL LMSLRLQLCN SFPGISKNRA FAEFIVASLI 120
  121 LHFVCLHFIN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	89.173925
Match:	PF02109.5
Description:	No description for PF02109.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits