| Protein: | RRT8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 342 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRT8.
| Description | E-value | Query Range |
Subject Range |
|
|
404.0 | [0..1] | [310..1] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MKAGIELISH SQASHATYAN SMTLAEKGPQ RLKRQFKEHS SSKESNVSRW LKIFIRQFDI 60
61 WFPETIPTMK VRYELLRKNF IKEIFNSRAF IYPFLGFYEV LTNPVYWKHI LLFAVCYALI 120
121 FVTIAGLFYV TLVPLLVTWA ILLLGPLGVI LVHIQWILQT NVLTAFVCRT LVLTHITNQI 180
181 FDISLVLQDQ DEFLNEVKVL PKPQKPHRKI DEPDAVRNFN T
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [222-342] |
1 11 21 31 41 51
| | | | | |
1 IKGSRIFKIP RLLFRMFFKV SNFTSLTLLS LIPIVGPILA NQLMAPKRTF TYLQRYFLLK 60
61 GFSKKQAKDF QYEHYASFIC FGMSAGLLEL IPFFTIVTIS SNTVGAAKWC TSLLKGERKK 120
121 E
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.779 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.624 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.564 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.462 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.457 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
