YRC Public Data Repository - Protein Structure Prediction

Protein:	YLR012C
Organism:	Saccharomyces cerevisiae
Length:	99 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR012C.

Description	E-value	Query Range	Subject Range
YLR012C - Putative protein of unknown function; YLR012C is not an essential gene	160.0	[0..1]	[99..24]
gi\|44986383 - gi\|44986383\|gb\|AAS54843.1\| AGR353Cp [Ashbya gossypii ATCC 10895] gi\|44986383, gi\|... - gi\|45201449\|ref\|NP_987019.1\| AGR353Cp [Ashbya gossypii ATCC 10895], gi\|44986383\|gb\|AAS54843.1\| AGR35...	135.0	[0..11]	[91..94]

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Predicted Domain #1

Region A:
Residues: [1-99]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVYYKEIT YQQYLQLQPE QQEKYLALCQ KDFEQETERI AFDRQGGVPG IARKFAQEEV  60
   61 AWFDRVTTWS YMNAYIPSYR RRRNLLKIDM LKMSNAEEY

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits