YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YKR045C
Organism: Saccharomyces cerevisiae
Length: 183 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKR045C.

Description E-value Query
Range
Subject
Range
YKR045C - Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm
208.0 [0..1] [183..9]

Back

Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSHHTSQG RRNKLSVWVK KIINTTTTTN ASVSSSKPRR GTRAGPTRVK RAELDPDGTT  60
   61 ISSSLRPLVD RNSLHSSESD DEGDRRVAWD EPPTGKVRQQ QQQQQQQQND NASVIPLVSF 120
  121 CSSSVKSSTF SDIHSIQSTR PTIFSNRTFE TNSSVLAIPP QSILDRSRTL PPSNASNTTT 180
  181 RRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle