YRC Public Data Repository - Protein Structure Prediction

Protein:	YIR014W
Organism:	Saccharomyces cerevisiae
Length:	242 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIR014W.

Description	E-value	Query Range	Subject Range
YIR014W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th... gi\|207344240 - gi\|207344240\|gb\|EDZ71450.1\| YIR014Wp-like protein [Saccharomyces cerevisiae AWRI1631]	418.0	[0..1]	[242..35]

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Predicted Domain #1

Region A:
Residues: [1-242]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHLEDDNGR QRSVIANLQK FVYCCLYLRF IKDGSLFLIL LGWIISSLCD FIQELTLRYL  60
   61 KKNYLEVGRD NDQEDDESLA IRGLETPIVR MIINKAIRYY QGLILLETAY CIVYHIRLDV 120
  121 SRDICSKPYG FVIMLLIREF TCPVPTAFPS KLLLVLLDIL LLFCQIVIIN GSLSSSLQNV 180
  181 KLIVKELNAE EEGALNILKL NTWHMDATGP ELIVLKNHDK SIPQQADGDD ATEITPLLNI 240
  241 AE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits