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Protein: RTT102
Organism: Saccharomyces cerevisiae
Length: 157 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RTT102.

Description E-value Query
Range
Subject
Range
RTT102 - Component of both the SWI/SNF and RSC chromatin remodeling complexes, suggested role in chromosome m...
289.0 [0..1] [157..30]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPQTLITKA NKVSYYGNPT SKESWRYDWY QPSKVSSNVQ QPQQQLGDME NNLEKYPFRY  60
   61 KTWLRNQEDE KNLQRESCED ILDLKEFDRR ILKKSLMTSH TKGDTSKATG APSANQGDEA 120
  121 LSVDDIRGAV GNSEAIPGLS AGVNNDNTKE SKDVKMN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 93.267606
Match: PF09510.1
Description: No description for PF09510.1 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle