| Protein: | JIP4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 876 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JIP4.
| Description | E-value | Query Range |
Subject Range |
|
|
878.0 | [0..70] | [838..71] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MVVRDQDEAL RNSYKYVKLY VRQDQLEDTV DILAKQDEDK SNNDDRRSLA SILDSSSSVK 60
61 KKGKGSNEKY LPCVSFNTVP RSRVSSPLDE EKREFPGVQI SADYTMEEYY DDESGFTSDN 120
121 NADYFSGNSY SSRREGSASP GRYSSPPPAS KRNIKIGKMF KISENGKIVR EDYPTTPTDI 180
181 NDALVISRAY ANWRQLWIKK KNQIDHRLEQ KRDFFNYPTI L
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [222-464] |
1 11 21 31 41 51
| | | | | |
1 FPPNKKKSSE GATPTIKFNP PIEDGFTPLT KSQKRKERVL SEKVGFPNTP RTILCHISGR 60
61 KHTWVALDWA LRTLIQNTDH IVVLANLPRL TKNNFEDNDS MSERKRMLMM MDDSRSVSSA 120
121 RRSRSRSRSR SICTRRALSL GPEESDNKLK HQNFIEWTSG YTQNEIERKL QDLFDYVTLI 180
181 IPQDRSVKVT VEILIGKTKK TLLEAINIYL PDFFVSSTLR WERTDSLVRW KSNFLTDKLC 240
241 TNF
|
| Detection Method: | |
| Confidence: | 2.72 |
| Match: | 1wjgA |
| Description: | Crystal structure of a probable ATP binding protein from thermus themophilus HB8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.0212563363932834 | bayes_pls_golite062009 |
|
Region A: Residues: [465-698] |
1 11 21 31 41 51
| | | | | |
1 PIPTFIVPAK RMFDLEIDLQ KEFKEPEVTK QKNTSGPKPG FSHSKSADAS IPTISNIKRK 60
61 QDNDYSIDSL CYAPEANGAN NSSREEASDD ELNAFKDDEN DVMSVKSLTS NISVKEKLCT 120
121 MARKRRKSMA QQLNDADHDS SIPPGQRHLK KLNIILESSL KFSLEIDSIT DSIENGDVDE 180
181 KRAHSMESGF EELKRVITGG APPRHVATPQ RSMLDVLDNP SSSRSKSKSR SSSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [699-876] |
1 11 21 31 41 51
| | | | | |
1 SRIRDKSKPS SPTATDINSS ASASRSRSPQ IKFASSVKNV DGNAALGAIK SRHSLDSPGD 60
61 QQQQHHHHHH RDTDQLSVPG LPHLAPSKSY SVSSGNKDSS LRKVSSSSSL RKVKSNDSNS 120
121 GKRIKKPVVT SAHLKPSSGG GGLFSFFKSK SRSPSSFRKE DESKNTPKRG GLFGFGRL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
