YRC Public Data Repository - Protein Structure Prediction

Protein:	ARR3
Organism:	Saccharomyces cerevisiae
Length:	404 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR3.

Description	E-value	Query Range	Subject Range
gi\|71155563, gi\|... - gi\|71368737\|ref\|ZP_00659224.1\| Arsenical-resistance protein ACR3 [Nocardioides sp. JS614], gi\|711555...	280.0	[0..17]	[398..225]
gi\|39546561 - gi\|39546561\|gb\|AAR28088.1\| putative arsenite efflux pump [Saccharomyces douglasii]	277.0	[0..1]	[404..1]
gi\|148568161, gi... - gi\|148656051\|ref\|YP_001276256.1\| arsenical-resistance protein [Roseiflexus sp. RS-1], gi\|148568161\|g...	273.0	[0..16]	[402..5]
gi\|78220238, gi\|... - gi\|78357833\|ref\|YP_389282.1\| arsenical-resistance protein [Desulfovibrio desulfuricans subsp. desulf...	266.0	[0..22]	[401..1]
gi\|56419123, gi\|... - gi\|56419123\|ref\|YP_146441.1\| arsenic oxyanion-translocation pump [Geobacillus kaustophilus HTA426], ...	264.0	[0..22]	[402..1]
gi\|37201567, gi\|... - gi\|37677022\|ref\|NP_937418.1\| arsenite efflux pump ACR3 [Vibrio vulnificus YJ016], gi\|37201567\|dbj\|BA...	264.0	[0..13]	[398..14]
gi\|229319759, gi... - gi\|229493257\|ref\|ZP_04387048.1\| arsenical-resistance protein [Rhodococcus erythropolis SK121], gi\|22... gi\|77019726, gi\|... - gi\|77454726\|ref\|YP_345594.1\| putative arsenite export protein [Rhodococcus erythropolis PR4], gi\|770...	263.0	[0..15]	[401..1]
gi\|23308852, gi\|... - gi\|23308852\|ref\|NP_600726.2\| arsenite efflux pump ACR3 [Corynebacterium glutamicum ATCC 13032], gi\|2...	260.0	[0..12]	[401..18]
gi\|23126620 - gi\|23126620\|ref\|ZP_00108510.1\| COG0798: Arsenite efflux pump ACR3 and related permeases [Nostoc punc...	260.0	[0..22]	[404..6]
gi\|33669026, gi\|... - gi\|33867192\|ref\|NP_898750.1\| putative oxyanion-translocation protein (ArsB) [Rhodococcus erythropoli...	260.0	[0..16]	[402..3]

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Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDQKSENS VPSKVNMVNR TDILTTIKSL SWLDLMLPFT IILSIIIAVI ISVYVPSSRH  60
   61 TFDAEGHPNL MGVSIPLTVG MIVMMIPPIC KVSWESIHKY FYRSYIRKQL ALSLFLNWVI 120
  121 GPLLMTALAW MALFDYKEYR QGIIMIGVAR CIAMVLIWNQ IAGGDNDLCV VLVITNSLLQ 180
  181 MVLYAPLQIF YCYVISHDHL NTSNRVLFEE VAKSVGVFLG IPLGIGIIIR LGSLTIAGKS 240
  241 NYEKYILRFI SPWAMIGFHY TLFVIFISRG YQFIHEI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	86.886057
Match:	PF01758.7
Description:	No description for PF01758.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [278-404]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSAILCFVPL VLYFFIAWFL TFALMRYLSI SRSDTQRECS CDQELLLKRV WGRKSCEASF  60
   61 SITMTQCFTM ASNNFELSLA IAISLYGNNS KQAIAATFGP LLEVPILLIL AIVARILKPY 120
  121 YIWNNRN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits