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View Structure Prediction Details

Protein: YPR174C
Organism: Saccharomyces cerevisiae
Length: 221 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR174C.

Description E-value Query
Range
Subject
Range
YPR174C - Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nuclear...
YP174_YEAST - Nuclear envelope protein YPR174C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR174C...
YPR174C_W303 - ORF Verified Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes t...
0.0 [1..221] [1..221]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQEKTLGI RKERKLVVVP RERNHVRHAS QRTRSKNYKN ISKKRAQQHA FGFNIAKTLA  60
   61 KIQAFVWGSP ADEEEESVVP LSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSQDCVPLQW QAKFAQLRQQ LHSTQKELQF VKEKCHLLQS VLDDANIDQR YLESRRDMKN  60
   61 IERDNLKPTE NLPPSPVRAV NPLVTSSPIH MSPLQSRQRP VSSLQPPKGP NFYAKYPKLP 120
  121 QTNILRESPT EDSVPHAE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle